RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 IFRD1O00458 451 aaPredicted RBP16.09■□□□□ 0.17
GNE-202ENST00000396594 MAFO75444 373 aaPredicted RBP16.09■□□□□ 0.17
GNE-202ENST00000396594 PGK2P07205 417 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 MLNP12872 115 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 OTUD4Q01804 1114 aaKnown RBP16.09■□□□□ 0.17
GNE-202ENST00000396594 ZDHHC20Q5W0Z9 365 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 ADCK2Q7Z695 626 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 SH3RF1Q7Z6J0 888 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 RXFP2Q8WXD0 754 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 PHF21AQ96BD5 680 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 POPDC2Q9HBU9 364 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 FAM50BQ9Y247 325 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 NCKAP1Q9Y2A7 1128 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 RWDD3Q9Y3V2 267 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 TNPO3Q9Y5L0 923 aaKnown RBP16.09■□□□□ 0.17
GNE-202ENST00000396594 JAK1P23458 1154 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 GP5P40197 560 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 ALDH18A1P54886 795 aaKnown RBP16.09■□□□□ 0.17
GNE-202ENST00000396594 SLC12A3P55017 1021 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 PRKAA1Q13131 559 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 HYIQ5T013 277 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 ANKS6Q68DC2 871 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 UPP2O95045 317 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 IKBKEQ14164 716 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 PTGISQ16647 500 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 LRRC23Q53EV4 343 aaPredicted RBP16.09■□□□□ 0.17
GNE-202ENST00000396594 SLC25A41Q8N5S1 370 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 GPRC5DQ9NZD1 345 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 CTNNAL1Q9UBT7 734 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 VPS28Q9UK41 221 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 TTLL13PA6NNM8 815 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 RAD51BO15315 384 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 FKBP6O75344 327 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 AKAP3O75969 853 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 NOS2P35228 1153 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 KRT20P35900 424 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 PEX5P50542 639 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 CNGA2Q16280 664 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 C6orf10Q5SRN2 563 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 MTMR14Q8NCE2 650 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 THOC1Q96FV9 657 aaKnown RBP16.08■□□□□ 0.17
GNE-202ENST00000396594 TMBIM4Q9HC24 238 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 ANLNQ9NQW6 1124 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 IL17RBQ9NRM6 502 aa16.08■□□□□ 0.17
GNE-202ENST00000396594 DNALI1O14645 258 aaPredicted RBP16.08■□□□□ 0.16
GNE-202ENST00000396594 ZNF862O60290 1169 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 OR56A5P0C7T3 313 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 CYP2F1P24903 491 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 HSD17B3P37058 310 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 CD151P48509 253 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 MPP3Q13368 585 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 ZIM3Q96PE6 472 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 ACTL7BQ9Y614 415 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 RPL3P39023 403 aaKnown RBP16.08■□□□□ 0.16
GNE-202ENST00000396594 PCSK7Q16549 785 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 MDH1BQ5I0G3 518 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 TAS1R2Q8TE23 839 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 C17orf80Q9BSJ5 609 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 CYLDQ9NQC7 956 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 APOC4-APOC2K7ER74 178 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 KATNA1O75449 491 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 APOC2P02655 101 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 GHRP10912 638 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 TMEM62Q0P6H9 643 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 NOGQ13253 232 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 CHI3L2Q15782 390 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 ZCCHC8Q6NZY4 707 aaKnown RBP16.08■□□□□ 0.16
GNE-202ENST00000396594 POLNQ7Z5Q5 900 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 TMEM199Q8N511 208 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 PNMA5Q96PV4 448 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 POLD4Q9HCU8 107 aa16.08■□□□□ 0.16
GNE-202ENST00000396594 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
GNE-202ENST00000396594 OR6C75A6NL08 312 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 RRM2P31350 389 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 SEL1L3Q68CR1 1132 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 MS4A14Q96JA4 679 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 TINF2Q9BSI4 451 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 PI4K2AQ9BTU6 479 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 LGALS2P05162 132 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 ENO1P06733 434 aaKnown RBP16.07■□□□□ 0.16
GNE-202ENST00000396594 CALB2P22676 271 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 TM4SF1P30408 202 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 MRPS35P82673 323 aaKnown RBP16.07■□□□□ 0.16
GNE-202ENST00000396594 RUNX1T1Q06455 604 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 ZNF606Q8WXB4 792 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 PPP3CCP48454 512 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 FBXO36Q8NEA4 188 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 NPHS2Q9NP85 383 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 VANGL2Q9ULK5 521 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 NCANO14594 1321 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 CHADO15335 359 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 PSMD10O75832 226 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 PYGMP11217 842 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 PPARDQ03181 441 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 MAP2K5Q13163 448 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 CRY2Q49AN0 593 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 TOP6BLQ8N6T0 577 aa16.07■□□□□ 0.16
GNE-202ENST00000396594 ZNF655Q8N720 491 aaPredicted RBP16.07■□□□□ 0.16
GNE-202ENST00000396594 ATXN2LQ8WWM7 1075 aaKnown RBP16.07■□□□□ 0.16
GNE-202ENST00000396594 ATL1Q8WXF7 558 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms