RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 HTR4Q13639 388 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 TRIP4Q15650 581 aaPredicted RBP22.22■■□□□ 1.15
FXN-202ENST00000396364 SLC25A52Q3SY17 297 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 NUGGCQ68CJ6 796 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 TMEM139Q8IV31 216 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 UNC45BQ8IWX7 931 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 TTC16Q8NEE8 873 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 SH3RF2Q8TEC5 729 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 NCAPGQ9BPX3 1015 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 KLF16Q9BXK1 252 aaPredicted RBP22.22■■□□□ 1.15
FXN-202ENST00000396364 UVRAGQ9P2Y5 699 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 LIMD1Q9UGP4 676 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 SFMBT1Q9UHJ3 866 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 TLR6Q9Y2C9 796 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 PCDHA13Q9Y5I0 950 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 NUMBLQ9Y6R0 609 aa22.22■■□□□ 1.15
FXN-202ENST00000396364 E2F8A0AVK6 867 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 HEPACAM2A8MVW5 462 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 M0QYT0 321 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 LEFTY2O00292 366 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 ATMINO43313 823 aaPredicted RBP22.21■■□□□ 1.15
FXN-202ENST00000396364 PRAMEF12O95522 483 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 CYP1A2P05177 515 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 PSMC3P17980 439 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 PTPN9P43378 593 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 SULT1E1P49888 294 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 TBX4P57082 545 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 RING1Q06587 406 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 SYPL2Q5VXT5 272 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 TANGO2Q6ICL3 276 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 PARM1Q6UWI2 310 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 MFSD6LQ8IWD5 586 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 RHOT2Q8IXI1 618 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 RXFP2Q8WXD0 754 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 KHSRPQ92945 711 aaKnown RBP eCLIP22.21■■□□□ 1.15
FXN-202ENST00000396364 RNF34Q969K3 372 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 SMG9Q9H0W8 520 aaKnown RBP22.21■■□□□ 1.15
FXN-202ENST00000396364 DDIT4Q9NX09 232 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 CTTNBP2NLQ9P2B4 639 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 CFAP97Q9P2B7 532 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 TBC1D14Q9P2M4 693 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 SLC12A6Q9UHW9 1150 aa22.21■■□□□ 1.15
FXN-202ENST00000396364 TCRBV5S1A1TA0A578 114 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 C2CD4BA6NLJ0 364 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 MDM4O15151 490 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 APOEP02649 317 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 FCARP24071 287 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 RFC1P35251 1148 aaPredicted RBP22.2■■□□□ 1.14
FXN-202ENST00000396364 FLT3P36888 993 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 VIPR2P41587 438 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 DEUP1Q05D60 604 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 USP4Q13107 963 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 MTF1Q14872 753 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 ARHGAP29Q52LW3 1261 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 PPP1R15BQ5SWA1 713 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 RAD9BQ6WBX8 426 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 KIAA1328Q86T90 577 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 TAC4Q86UU9 113 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 EMC1Q8N766 993 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 FNIP1Q8TF40 1166 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 FGF14Q92915 247 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 PGAP3Q96FM1 320 aaPredicted RBP22.2■■□□□ 1.14
FXN-202ENST00000396364 NPY6RQ99463 290 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 KXD1Q9BQD3 176 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 TRMT61BQ9BVS5 477 aaKnown RBP22.2■■□□□ 1.14
FXN-202ENST00000396364 NUP85Q9BW27 656 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 KCNK12Q9HB15 430 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.2■■□□□ 1.141e-6■■■■□ 25.4
FXN-202ENST00000396364 CCL26Q9Y258 94 aa22.2■■□□□ 1.14
FXN-202ENST00000396364 C19orf67A6NJJ6 358 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 IRAK2O43187 625 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 IRF1P10914 325 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 CCR1P32246 355 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 ZNF143P52747 638 aaPredicted RBP22.19■■□□□ 1.14
FXN-202ENST00000396364 ZNF77Q15935 545 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 STRADAQ7RTN6 431 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 JOSD2Q8TAC2 188 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 NT5C3BQ969T7 300 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 OTUB2Q96DC9 234 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 CALR3Q96L12 384 aaKnown RBP22.19■■□□□ 1.14
FXN-202ENST00000396364 CFAP57Q96MR6 1250 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 CNPY3Q9BT09 278 aa22.19■■□□□ 1.14
FXN-202ENST00000396364 TMEM191CA6NGB0 347 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 RNF8O76064 485 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 HMBSP08397 361 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 RDXP35241 583 aaKnown RBP22.18■■□□□ 1.14
FXN-202ENST00000396364 IFNAR2P48551 515 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 NME3Q13232 169 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 ACAP1Q15027 740 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 VITQ6UXI7 678 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 DNAAF5Q86Y56 855 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 ZNF564Q8TBZ8 553 aaPredicted RBP22.18■■□□□ 1.14
FXN-202ENST00000396364 ADAM32Q8TC27 787 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 ZFRQ96KR1 1074 aaKnown RBP22.18■■□□□ 1.14
FXN-202ENST00000396364 DDX50Q9BQ39 737 aaKnown RBP22.18■■□□□ 1.14
FXN-202ENST00000396364 GKN1Q9NS71 199 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 IP6K2Q9UHH9 426 aa22.18■■□□□ 1.14
FXN-202ENST00000396364 TCF20Q9UGU0 1960 aaKnown RBP22.18■■□□□ 1.14
FXN-202ENST00000396364 SYNJ2BP-COX16A0A087WUM0 186 aa22.17■■□□□ 1.14
FXN-202ENST00000396364 MYO1FO00160 1098 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms