RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 ADGRF4Q8IZF3 695 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 GIPC2Q8TF65 315 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 FAM111AQ96PZ2 611 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 P2RX7Q99572 595 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 SERPINI1Q99574 410 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 POLR1BQ9H9Y6 1135 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 LRRC4CQ9HCJ2 640 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 POLE4Q9NR33 117 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 TMLHEQ9NVH6 421 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 RWDD3Q9Y3V2 267 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 V9GYQ6 96 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 E2F8A0AVK6 867 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 SH3PXD2BA1X283 911 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 CENPXA8MT69 81 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 FAM47E-STBD1D6RA91 191 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 COPEO14579 308 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 RGS5O15539 181 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ICMTO60725 284 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 NOL4O94818 638 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 PRKCBP05771 671 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 PABPC4LP0CB38 370 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 FOSL1P15407 271 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ADCY7P51828 1080 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 POTEHQ6S545 545 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 RHOT2Q8IXI1 618 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 GUF1Q8N442 669 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 VPS37AQ8NEZ2 397 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 NRG4Q8WWG1 115 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ATG4AQ8WYN0 398 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 RNF208Q9H0X6 261 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 MRPL39Q9NYK5 338 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 TAS2R1Q9NYW7 299 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 FBXO40Q9UH90 709 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 GTF3C4Q9UKN8 822 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 FAM237BA0A1B0GVD1 139 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 CCNT2O60583 730 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 FBXO21O94952 628 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 CALB1P05937 261 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ADRA1DP25100 572 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 KRT6CP48668 564 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 CACNB3P54284 484 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 DYNLT1P63172 113 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 LRRC63Q05C16 580 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 SLC18A3Q16572 532 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 SFT2D3Q587I9 215 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 PHC2Q8IXK0 858 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 SDR16C5Q8N3Y7 309 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 C12orf50Q8NA57 414 aaPredicted RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 NLRP4Q96MN2 994 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ACAT2Q9BWD1 397 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 GBA3Q9H227 469 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 ITM2CQ9NQX7 267 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 C20orf96Q9NUD7 363 aaPredicted RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 STK17AQ9UEE5 414 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 PGAP2Q9UHJ9 254 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 MRPS7Q9Y2R9 242 aaKnown RBP8.69□□□□□ -1.02
NDE1-202ENST00000396355 NEU2Q9Y3R4 380 aa8.69□□□□□ -1.02
NDE1-202ENST00000396355 FAM187AA6NFU0 413 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 A8MXQ7 604 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 PI4K2BG5E9Z4 385 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 EN2P19622 333 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 BGNP21810 368 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ANXA13P27216 316 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 SHMT1P34896 483 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 RPL21P46778 160 aaKnown RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 AQP5P55064 265 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 UBXN2AP68543 259 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ZNF543Q08ER8 600 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 DCAF15Q66K64 600 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 RNF207Q6ZRF8 634 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 KCTD1Q719H9 257 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ALYREFQ86V81 257 aaKnown RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 SYTL1Q8IYJ3 562 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ULK2Q8IYT8 1036 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 SNX19Q92543 992 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 DGCR6LQ9BY27 220 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 WWP1Q9H0M0 922 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 RAD21L1Q9H4I0 556 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 DNAJC18Q9H819 358 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 MYRFQ9Y2G1 1151 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 MTO1Q9Y2Z2 717 aaKnown RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 PVALEFA0A1B0GWK0 134 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 TBKBP1A7MCY6 615 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 TFECO14948 347 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 BIRC5O15392 142 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 KCNH1O95259 989 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 TAC1P20366 129 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 RPA3P35244 121 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 TCF7P36402 384 aaPredicted RBP8.68□□□□□ -1.02
NDE1-202ENST00000396355 SP4Q02446 784 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 COASYQ13057 564 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 IGSF11Q5DX21 431 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 HMBOX1Q6NT76 420 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 GALNT7Q86SF2 657 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 LRRC20Q8TCA0 184 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 ASZ1Q8WWH4 475 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 GATA6Q92908 595 aa8.68□□□□□ -1.02
NDE1-202ENST00000396355 UTP4Q969X6 686 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms