RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 DEFB106AQ8N104 65 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 CCDC110Q8TBZ0 833 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 SLC38A7Q9NVC3 462 aa17.4■□□□□ 0.38
NUP50-202ENST00000396096 CFAP73A6NFT4 308 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 AVILO75366 819 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 ALADP13716 330 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 PRKCHP24723 683 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 NOS2P35228 1153 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 SULT1E1P49888 294 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 HUNKP57058 714 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 SLC18A2Q05940 514 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 ADIGQ0VDE8 80 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 BNIP1Q12981 228 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 PTK7Q13308 1070 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 LVRNQ6Q4G3 990 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 KCNT2Q6UVM3 1135 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 SH2D5Q6ZV89 423 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 BZW1Q7L1Q6 419 aaKnown RBP17.39■□□□□ 0.38
NUP50-202ENST00000396096 VPS52Q8N1B4 723 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 LRRC8CQ8TDW0 803 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 SLC2A13Q96QE2 648 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 NPY6RQ99463 290 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 KLC4Q9NSK0 619 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 DTLQ9NZJ0 730 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 ZNF180Q9UJW8 692 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 PHTF1Q9UMS5 762 aa17.39■□□□□ 0.38
NUP50-202ENST00000396096 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.39■□□□□ 0.38
NUP50-202ENST00000396096 SCN10AQ9Y5Y9 1956 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 SF3B1O75533 1304 aaKnown RBP eCLIP17.39■□□□□ 0.372e-7■■■■■ 41.4
NUP50-202ENST00000396096 AKR1A1P14550 325 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 ARL4AP40617 200 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 MGAT5Q09328 741 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 DNAJC3Q13217 504 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 SEMA5AQ13591 1074 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 WSCD1Q658N2 575 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 FAM47EQ6ZV65 393 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 ZNF276Q8N554 614 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 MAGEB5Q9BZ81 275 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 PLAC1Q9HBJ0 212 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 TMEM51Q9NW97 253 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 ZC3H7BQ9UGR2 993 aaKnown RBP17.39■□□□□ 0.37
NUP50-202ENST00000396096 TRPV2Q9Y5S1 764 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 IKBKGQ9Y6K9 419 aa17.39■□□□□ 0.37
NUP50-202ENST00000396096 DUSP11O75319 330 aaKnown RBP17.38■□□□□ 0.37
NUP50-202ENST00000396096 MAP3K6O95382 1288 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 METTL18O95568 372 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 MT-ND3P03897 115 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 APRTP07741 180 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 INHBAP08476 426 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 FAM133BQ5BKY9 247 aaKnown RBP17.38■□□□□ 0.37
NUP50-202ENST00000396096 FAXCQ5TGI0 409 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 CLEC20AQ6ZU45 233 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 ZNF534Q76KX8 674 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 SLC26A11Q86WA9 606 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 ECHDC2Q86YB7 292 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 TMEM86AQ8N2M4 240 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 RMDN2Q96LZ7 410 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 VPS11Q9H270 941 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 TSPYL2Q9H2G4 693 aaPredicted RBP17.38■□□□□ 0.37
NUP50-202ENST00000396096 RRAGCQ9HB90 399 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 CHST12Q9NRB3 414 aa17.38■□□□□ 0.37
NUP50-202ENST00000396096 PIAS1O75925 651 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 GOT1P17174 413 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 AMPD1P23109 780 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 NEK3P51956 506 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 NCALDP61601 193 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 FAAP100Q0VG06 881 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 SYCP2LQ5T4T6 812 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 HEATR6Q6AI08 1181 aaKnown RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 CYB5D1Q6P9G0 228 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 HACE1Q8IYU2 909 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 FITM2Q8N6M3 262 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 GSTCDQ8NEC7 633 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 TCP10LQ8TDR4 215 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 TFB1MQ8WVM0 346 aaKnown RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 SPOCK2Q92563 424 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 ZNF75CPQ92670 426 aaPredicted RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 APBB2Q92870 758 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 SIGLEC10Q96LC7 697 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 ZFP42Q96MM3 310 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 LRRC4Q9HBW1 653 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 XAB2Q9HCS7 855 aaKnown RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 ARHGEF4Q9NR80 690 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 STAP1Q9ULZ2 295 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 CDY2AQ9Y6F7 541 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 H3BRJ5 948 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 M0QZ92 97 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 CLDN5O00501 218 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 BEST1O76090 585 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 FBXO21O94952 628 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 DHRS4L1P0CG22 281 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 ADRA1DP25100 572 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 FDFT1P37268 417 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 CDK16Q00536 496 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 TTC39BQ5VTQ0 682 aaPredicted RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 KIAA0319Q5VV43 1072 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 PRPF39Q86UA1 669 aaKnown RBP17.37■□□□□ 0.37
NUP50-202ENST00000396096 FAM131BQ86XD5 332 aa17.37■□□□□ 0.37
NUP50-202ENST00000396096 PYROXD2Q8N2H3 581 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms