RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MAGEA4P43358 317 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 KYAT3Q6YP21 454 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 KDM7AQ6ZMT4 941 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ILDR2Q71H61 639 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SPATA24Q86W54 205 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 IQCKQ8N0W5 287 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 STK40Q8N2I9 435 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 NLGN2Q8NFZ4 835 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 BRI3BPQ8WY22 251 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PEX13Q92968 403 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 FBXO32Q969P5 355 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CMTM5Q96DZ9 223 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 DNPEPQ9ULA0 475 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ST3GAL5Q9UNP4 418 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 F5H5T6 163 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RAMP2O60895 175 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ASGR1P07306 291 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CARSP49589 748 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GOLGA7BQ2TAP0 167 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TTC39BQ5VTQ0 682 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SLC2A14Q8TDB8 520 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CCDC97Q96F63 343 aaPredicted RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ANKRD27Q96NW4 1050 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 POP1Q99575 1024 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 VPS11Q9H270 941 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PDLIM7Q9NR12 457 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 NOCTQ9UK39 431 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 NOVA2Q9UNW9 492 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ESYT3A0FGR9 886 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SOWAHBA6NEL2 793 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 FSCN2O14926 492 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ZMYND10O75800 440 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 C22orf31O95567 290 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PRKAR2AP13861 404 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TYMPP19971 482 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 BRD2P25440 801 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 RFC2P35250 354 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GJA9P57773 515 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 C1orf127Q8N9H9 656 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ZSWIM2Q8NEG5 633 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 HTR3CQ8WXA8 447 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 BORCS6Q96GS4 357 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ADAM2Q99965 735 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 LRCH4O75427 683 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SGPL1O95470 568 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ITKQ08881 620 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 USP41Q3LFD5 358 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ANKS1BQ7Z6G8 1248 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SIK2Q9H0K1 926 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TBC1D13Q9NVG8 400 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 SEPT10Q9P0V9 454 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CEP350Q5VT06 3117 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 CTSHP09668 335 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MIPP30301 263 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 AGAP9Q5VTM2 703 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 HERC6Q8IVU3 1022 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GLIS3Q8NEA6 775 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 PPHLN1Q8NEY8 458 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 GIMAP7Q8NHV1 300 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 NTAN1Q96AB6 310 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 STRA6Q9BX79 667 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 STN1Q9H668 368 aaKnown RBP3.5□□□□□ -1.85
VPS13C-203ENST00000395896 STOML1Q9UBI4 398 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 OR12D3Q9UGF7 316 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 TBK1Q9UHD2 729 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 ALPK2Q86TB3 2170 aa3.5□□□□□ -1.85
VPS13C-203ENST00000395896 MBLAC1A4D2B0 266 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 E5RJQ4 531 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ADH1AP07327 375 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 KDELR1P24390 212 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 YWHAQP27348 245 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ST8SIA6P61647 398 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TMPRSS15P98073 1019 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SLC10A6Q3KNW5 377 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 NUP93Q8N1F7 819 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 MICALL1Q8N3F8 863 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TMEM199Q8N511 208 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SYTL2Q9HCH5 934 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PRDM10Q9NQV6 1147 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SCAF8Q9UPN6 1271 aaKnown RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ASB3Q9Y575 518 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 CACNA1IQ9P0X4 2223 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 A0A0A0MRY4 1105 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 S100BP04271 92 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 CYP1A1P04798 512 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 PYGMP11217 842 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 AVPR1AP37288 418 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SULT1E1P49888 294 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ZNF211Q13398 564 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 CTXN3Q4LDR2 81 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 OR6P1Q8NGX9 317 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 AENQ8WTP8 325 aaKnown RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 SPATA13Q96N96 652 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 HAPLN3Q96S86 360 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 TRMOQ9BU70 441 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 HTATIP2Q9BUP3 242 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 LRG1P02750 347 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 ADRB2P07550 413 aa3.49□□□□□ -1.85
VPS13C-203ENST00000395896 CTCFP49711 727 aaPredicted RBP3.49□□□□□ -1.85
VPS13C-203ENST00000395896 YTHDF3Q7Z739 585 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms