RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 TMEM109Q9BVC6 243 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 ADNPQ9H2P0 1102 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 EPB41L4BQ9H329 900 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 CPVLQ9H3G5 476 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 MLXIPLQ9NP71 852 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 TNFRSF10DQ9UBN6 386 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 DPP7Q9UHL4 492 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 GRID1Q9ULK0 1009 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
MSH5-205ENST00000395853 FAM205AQ6ZU69 1335 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 A0A087X0B3 334 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 RASGRF2O14827 1237 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 NCAM2O15394 837 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 PMLP29590 882 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 ETV1P50549 477 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 PRMT2P55345 433 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 MOGSQ13724 837 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 GRM4Q14833 912 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 TRMT5Q32P41 509 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 USP41Q3LFD5 358 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 LSM12Q3MHD2 195 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 TCP11X2Q5H9J9 407 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 PIK3AP1Q6ZUJ8 805 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 DHDDSQ86SQ9 333 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 CLIP4Q8N3C7 705 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 ZNF579Q8NAF0 562 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 ICA1LQ8NDH6 482 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 SHCBP1Q8NEM2 672 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 HDAC2Q92769 488 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 TRIM63Q969Q1 353 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 TBC1D20Q96BZ9 403 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 RANBP9Q96S59 729 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 TRIM15Q9C019 465 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 NTN4Q9HB63 628 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 ATP13A2Q9NQ11 1180 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 CPSF3Q9UKF6 684 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 PPM1HQ9ULR3 514 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 PADI4Q9UM07 663 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 VPS4AQ9UN37 437 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 NEU2Q9Y3R4 380 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 DAGLAQ9Y4D2 1042 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 FOCADQ5VW36 1801 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 FKBP6O75344 327 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 USP2O75604 605 aaPredicted RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 INHBBP09529 407 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 DBTP11182 482 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 CD44P16070 742 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 CIITAP33076 1130 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 RFC1P35251 1148 aaPredicted RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 SLCO1A2P46721 670 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 NCKAP1LP55160 1127 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 YWHAGP61981 247 aaKnown RBP eCLIP9.18□□□□□ -0.94
MSH5-205ENST00000395853 POU6F2P78424 691 aaPredicted RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 ITGADQ13349 1161 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 MFSD5Q6N075 450 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 FAM171BQ6P995 826 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 C16orf86Q6ZW13 317 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 CCDC84Q86UT8 332 aaPredicted RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 FBXL6Q8N531 539 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 CCNYL1Q8N7R7 359 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 FAM172AQ8WUF8 416 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 SLC29A1Q99808 456 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 TARS2Q9BW92 718 aaKnown RBP9.18□□□□□ -0.94
MSH5-205ENST00000395853 ZHX3Q9H4I2 956 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 GPAMQ9HCL2 828 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 DAPK2Q9UIK4 370 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 ANAPC5Q9UJX4 755 aa9.18□□□□□ -0.94
MSH5-205ENST00000395853 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 CAPN14A8MX76 684 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 KCNJ18B7U540 433 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 DENRO43583 198 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 NDUFA2O43678 99 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 TAC1P20366 129 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 PRKAR1BP31321 381 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 PGM1P36871 562 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 GNL1P36915 607 aaPredicted RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 SRP54P61011 504 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 DLG4P78352 724 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 MRPS15P82914 257 aaKnown RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 ARHGAP4P98171 946 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 LRRC63Q05C16 580 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 STRN3Q13033 797 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 PICALMQ13492 652 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 NCOA4Q13772 614 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 KCNJ12Q14500 433 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 SLC29A2Q14542 456 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 LEXMQ3ZCV2 418 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 TTC38Q5R3I4 469 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 ZNF658Q5TYW1 1059 aaPredicted RBP9.17□□□□□ -0.94
MSH5-205ENST00000395853 HGSNATQ68CP4 663 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 TTBK2Q6IQ55 1244 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 PAOXQ6QHF9 649 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 DBX2Q6ZNG2 339 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 RFX8Q6ZV50 586 aa9.17□□□□□ -0.94
MSH5-205ENST00000395853 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms