RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 CCDC3Q9BQI4 270 aa13.26□□□□□ -0.29
CAST-206ENST00000395812 TMEM175Q9BSA9 504 aa13.26□□□□□ -0.29
CAST-206ENST00000395812 PHRF1Q9P1Y6 1649 aaKnown RBP13.26□□□□□ -0.29
CAST-206ENST00000395812 SDK1Q7Z5N4 2213 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 NRP1O14786 923 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 H2AFYO75367 372 aaKnown RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 ERVK-10P10266 1014 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 CD44P16070 742 aaKnown RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 PPP3CCP48454 512 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 DAB2P98082 770 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 CAMK2GQ13555 558 aaPredicted RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 NAT16Q8N8M0 369 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 POF1BQ8WVV4 589 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ZBTB10Q96DT7 871 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FRMD8P1Q9BZ68 369 aaPredicted RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 ZDHHC6Q9H6R6 413 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ARHGAP28Q9P2N2 729 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 TRMT6Q9UJA5 497 aaKnown RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 PROSCO94903 275 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ANP32DO95626 131 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 MSH3P20585 1137 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FSHRP23945 695 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 HDAC4P56524 1084 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ERVK-21P61565 698 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 PDCLQ13371 301 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ARID5BQ14865 1188 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FIGNQ5HY92 759 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 MFSD4BQ5TF39 518 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 USP45Q70EL2 814 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 WDR75Q8IWA0 830 aaKnown RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 GRIN3AQ8TCU5 1115 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 NUF2Q9BZD4 464 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 A0A1B0GUA9 196 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 NEDD8-MDP1E9PL57 170 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FGF10O15520 208 aaPredicted RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 SPRP35270 261 aaPredicted RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 JAG1P78504 1218 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 TMPRSS15P98073 1019 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 MPPE1Q53F39 396 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 COBLL1Q53SF7 1204 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FAM71DQ8N9W8 422 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 MTMR8Q96EF0 704 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ACBD6Q9BR61 282 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 VCXQ9H320 206 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 DZANK1Q9NVP4 752 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 DUS2Q9NX74 493 aaKnown RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 ADGRA2Q96PE1 1338 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 A0A087X0T9 212 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 PER2O15055 1255 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FAM228BP0C875 321 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 PBLDP30039 288 aaPredicted RBP13.25□□□□□ -0.29
CAST-206ENST00000395812 MBTD1Q05BQ5 628 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 PPP3CAQ08209 521 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 DBN1Q16643 649 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 KIF19Q2TAC6 998 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 TFDP3Q5H9I0 405 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 FAM228AQ86W67 206 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 TTC17Q96AE7 1141 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 KDM4CQ9H3R0 1056 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 ARHGEF4Q9NR80 690 aa13.25□□□□□ -0.29
CAST-206ENST00000395812 DYRK3O43781 588 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 FGF18O76093 207 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 ADRB2P07550 413 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 INTS6LQ5JSJ4 861 aaKnown RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 SDCCAG3Q96C92 435 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 DNAJC19Q96DA6 116 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TRAIPQ9BWF2 469 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 XPO7Q9UIA9 1087 aaKnown RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3DA0A087WVF3 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3IA0A087WXS9 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3EA0A087X179 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3KA0A087X1G2 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 WDR91A4D1P6 747 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3FA6NER0 549 aaPredicted RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3LB9A6J9 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 OPLAHO14841 1288 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 VPS26AO75436 327 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TTC4O95801 387 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3HP0C7X1 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 KCNA5P22460 613 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 KELP23276 732 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 PTPN3P26045 913 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 ACAP1Q15027 740 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3GQ6DHY5 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3CQ6IPX1 549 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 EMBQ6PCB8 327 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 PRSS55Q6UWB4 352 aaPredicted RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 TBC1D3Q8IZP1 549 aaPredicted RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 ELMO2Q96JJ3 720 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 KIAA1522Q9P206 1035 aaPredicted RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 OR12D3Q9UGF7 316 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 TPX2Q9ULW0 747 aaKnown RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 KANSL1LA0AUZ9 987 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 CYP2F1P24903 491 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 CASP5P51878 434 aa13.24□□□□□ -0.29
CAST-206ENST00000395812 PDE12Q6L8Q7 609 aaKnown RBP13.24□□□□□ -0.29
CAST-206ENST00000395812 CHRDL2Q6WN34 429 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms