RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 BTBD8Q5XKL5 378 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 GRAMD4Q6IC98 578 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 KIAA1211LQ6NV74 962 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 SCML4Q8N228 414 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 MARCH2Q9P0N8 246 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 HOOK1Q9UJC3 728 aaKnown RBP16.96■□□□□ 0.31
CXCL12-206ENST00000395795 RASAL2Q9UJF2 1139 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 LSM7Q9UK45 103 aaKnown RBP16.96■□□□□ 0.31
CXCL12-206ENST00000395795 CNTN6Q9UQ52 1028 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 CTNND2Q9UQB3 1225 aa16.96■□□□□ 0.31
CXCL12-206ENST00000395795 NUP205Q92621 2012 aa16.96■□□□□ 0.3
CXCL12-206ENST00000395795 TNRC6BQ9UPQ9 1833 aaKnown RBP16.96■□□□□ 0.3
CXCL12-206ENST00000395795 TCRBV21S2A2A0A5A6 115 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 P4HA2O15460 535 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 PAEPP09466 180 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 CORO1AP31146 461 aaKnown RBP16.95■□□□□ 0.3
CXCL12-206ENST00000395795 PPP1R2P41236 205 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 WASP42768 502 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 COG7P83436 770 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 ADIGQ0VDE8 80 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 USP39Q53GS9 565 aaKnown RBP16.95■□□□□ 0.3
CXCL12-206ENST00000395795 PMF1Q6P1K2 205 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 TMEM270Q6UE05 265 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 PIWIL1Q96J94 861 aaKnown RBP16.95■□□□□ 0.3
CXCL12-206ENST00000395795 GABRG3Q99928 467 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 VPS45Q9NRW7 570 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 CIZ1Q9ULV3 898 aaPredicted RBP16.95■□□□□ 0.3
CXCL12-206ENST00000395795 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.95■□□□□ 0.3
CXCL12-206ENST00000395795 SLC27A6Q9Y2P4 619 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 CNOT1A5YKK6 2376 aaKnown RBP16.95■□□□□ 0.3
CXCL12-206ENST00000395795 THADAQ6YHU6 1953 aa16.95■□□□□ 0.3
CXCL12-206ENST00000395795 FOXD2O60548 495 aaPredicted RBP16.94■□□□□ 0.3
CXCL12-206ENST00000395795 RHOBTB1O94844 696 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 HMBSP08397 361 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 CD19P15391 556 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 BRD2P25440 801 aaKnown RBP16.94■□□□□ 0.3
CXCL12-206ENST00000395795 NTSR1P30989 418 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 RPL34P49207 117 aaKnown RBP16.94■□□□□ 0.3
CXCL12-206ENST00000395795 MFAP3P55082 362 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 DAOAP59103 153 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 GOLGA8FQ08AF8 430 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 GOLGA8DPQ0D2H9 430 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 KCNH2Q12809 1159 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 STIM1Q13586 685 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 ENPP2Q13822 863 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 ELF2Q15723 593 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 CNGA2Q16280 664 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 GEN1Q17RS7 908 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 CCDC40Q4G0X9 1142 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 BSPRYQ5W0U4 402 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 RRAGAQ7L523 313 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 IRF2BP1Q8IU81 584 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 ARHGAP18Q8N392 663 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 CPXM2Q8N436 756 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 EHBP1Q8NDI1 1231 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 HMGB4Q8WW32 186 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 BHMTQ93088 406 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 NT5C1BQ96P26 610 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 CDK5RAP1Q96SZ6 601 aaKnown RBP16.94■□□□□ 0.3
CXCL12-206ENST00000395795 DNAI2Q9GZS0 605 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 STOML2Q9UJZ1 356 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 KIAA1257Q9ULG3 409 aa16.94■□□□□ 0.3
CXCL12-206ENST00000395795 GON4LQ3T8J9 2241 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 SLC12A8A0AV02 714 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 PATE3B3GLJ2 98 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 WASH3PC4AMC7 463 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 CAVIN2O95810 425 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 SETSIPP0DME0 302 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 PTGER3P43115 390 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 DGKGP49619 791 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 YWHAEP62258 255 aaKnown RBP16.93■□□□□ 0.3
CXCL12-206ENST00000395795 GCNT1Q02742 428 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 CREB5Q02930 508 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 PAK1Q13153 545 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 STPG1Q5TH74 334 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 TMEM215Q68D42 235 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 TADA2BQ86TJ2 420 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 DENND1CQ8IV53 801 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 CLEC4CQ8WTT0 213 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 EDEM1Q92611 657 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 XPO6Q96QU8 1125 aaKnown RBP16.93■□□□□ 0.3
CXCL12-206ENST00000395795 SRRTQ9BXP5 876 aaKnown RBP16.93■□□□□ 0.3
CXCL12-206ENST00000395795 POLMQ9NP87 494 aaPredicted RBP16.93■□□□□ 0.3
CXCL12-206ENST00000395795 CD93Q9NPY3 652 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 SFMBT1Q9UHJ3 866 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 ZNF510Q9Y2H8 683 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 PCDHB4Q9Y5E5 795 aa16.93■□□□□ 0.3
CXCL12-206ENST00000395795 LNP1A1A4G5 178 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 BICDL2A1A5D9 508 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 ALDH1A2O94788 518 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 IGLV3-27P01718 113 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 FYNP06241 537 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 HOXB2P14652 356 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 GBP1P32455 592 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 RGS7P49802 495 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 AASDHQ4L235 1098 aaPredicted RBP16.92■□□□□ 0.3
CXCL12-206ENST00000395795 RNF43Q68DV7 783 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 MSANTD2Q6P1R3 559 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 FMNL3Q8IVF7 1028 aa16.92■□□□□ 0.3
CXCL12-206ENST00000395795 PPM1KQ8N3J5 372 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms