RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 GPRIN1Q7Z2K8 1008 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 SLC7A14Q8TBB6 771 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 PAFAH2Q99487 392 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 TMEM30AQ9NV96 361 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 TRPV2Q9Y5S1 764 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 CALRP27797 417 aaKnown RBP18.56■□□□□ 0.56
SREBF1-204ENST00000395756 BRCC3P46736 316 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 GEMIN4P57678 1058 aaKnown RBP18.56■□□□□ 0.56
SREBF1-204ENST00000395756 FAM133BQ5BKY9 247 aaKnown RBP18.56■□□□□ 0.56
SREBF1-204ENST00000395756 MFSD14CQ5VZR4 134 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 RSPH3Q86UC2 560 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 STK32AQ8WU08 396 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 PCED1BQ96HM7 432 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 TRMT13Q9NUP7 481 aaKnown RBP18.56■□□□□ 0.56
SREBF1-204ENST00000395756 MTMR10Q9NXD2 777 aa18.56■□□□□ 0.56
SREBF1-204ENST00000395756 DPYSL4O14531 572 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 TCEA3O75764 348 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 ABHD2P08910 425 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 MSH2P43246 934 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 WDR4P57081 412 aaKnown RBP18.55■□□□□ 0.56
SREBF1-204ENST00000395756 DNAJC3Q13217 504 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 KCNA10Q16322 511 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 XKR4Q5GH76 650 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 C6orf89Q6UWU4 347 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 AGMOQ6ZNB7 445 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 ARHGEF18Q6ZSZ5 1173 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 ULBP1Q9BZM6 244 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 XPNPEP3Q9NQH7 507 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 LGALS13Q9UHV8 139 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 PADI3Q9ULW8 664 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 FAM47DPA6NHR8 397 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 PHBP35232 272 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 MATKP42679 507 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 AP1B1Q10567 949 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 KBTBD12Q3ZCT8 623 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 ZDHHC17Q8IUH5 632 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 AGGF1Q8N302 714 aaeCLIP18.55■□□□□ 0.56
SREBF1-204ENST00000395756 MAGED2Q9UNF1 606 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-204ENST00000395756 LAMA3Q16787 3333 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 YJEFN3A6XGL0 299 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 E7ENQ6 273 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 DNM1LO00429 736 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 MGEA5O60502 916 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 FOXN2P32314 431 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 MRPS5P82675 430 aaKnown RBP18.55■□□□□ 0.56
SREBF1-204ENST00000395756 PRPF39Q86UA1 669 aaKnown RBP18.55■□□□□ 0.56
SREBF1-204ENST00000395756 ANKS4BQ8N8V4 417 aa18.55■□□□□ 0.56
SREBF1-204ENST00000395756 FRMD8P1Q9BZ68 369 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-204ENST00000395756 XPO1O14980 1071 aaKnown RBP18.54■□□□□ 0.56
SREBF1-204ENST00000395756 MDM4O15151 490 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 FAM200BP0CF97 657 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 ARL4AP40617 200 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 CRADDP78560 199 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 CACNB2Q08289 660 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-204ENST00000395756 EFHC1Q5JVL4 640 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 DENND5BQ6ZUT9 1274 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 HSFY1Q96LI6 401 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 HNRNPABQ99729 332 aaKnown RBP18.54■□□□□ 0.56
SREBF1-204ENST00000395756 SYT15Q9BQS2 421 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 SLCO1B3Q9NPD5 702 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 EURLQ9NYK6 297 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 PSMC3IPQ9P2W1 217 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-204ENST00000395756 C5orf60A6NFR6 353 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 SLC10A3P09131 477 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 NCAM1P13591 858 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 ACADSBP45954 432 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 TIGD5Q53EQ6 642 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 SLC9A4Q6AI14 798 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 TOP6BLQ8N6T0 577 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 ZNF670Q9BS34 389 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 DTLQ9NZJ0 730 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 PAK5Q9P286 719 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 SNX10Q9Y5X0 201 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 IKBKGQ9Y6K9 419 aa18.54■□□□□ 0.56
SREBF1-204ENST00000395756 TCRBV9S1A1TA0A576 114 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 PTPN9P43378 593 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 DEUP1Q05D60 604 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 SLC1A5Q15758 541 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 SEPT7Q16181 437 aaKnown RBP18.53■□□□□ 0.56
SREBF1-204ENST00000395756 PPM1NQ8N819 430 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 TEKT4Q8WW24 435 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 CKAP2Q8WWK9 683 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 PIGVQ9NUD9 493 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 Q9Y3F1 56 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 SRRM3A6NNA2 597 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-204ENST00000395756 CYBAP13498 195 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 TGM2P21980 687 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 WARSP23381 471 aaKnown RBP18.53■□□□□ 0.56
SREBF1-204ENST00000395756 DPYSL2Q16555 572 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 HEATR6Q6AI08 1181 aaKnown RBP18.53■□□□□ 0.56
SREBF1-204ENST00000395756 CASC4Q6P4E1 433 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 MIEF2Q96C03 454 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 ADAM2Q99965 735 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 KLC2Q9H0B6 622 aa18.53■□□□□ 0.56
SREBF1-204ENST00000395756 FAM72CH0Y354 149 aa18.52■□□□□ 0.56
SREBF1-204ENST00000395756 AMHP03971 560 aa18.52■□□□□ 0.56
SREBF1-204ENST00000395756 FCGRTP55899 365 aa18.52■□□□□ 0.56
SREBF1-204ENST00000395756 KCNJ11Q14654 390 aa18.52■□□□□ 0.56
SREBF1-204ENST00000395756 SLC25A52Q3SY17 297 aa18.52■□□□□ 0.56
SREBF1-204ENST00000395756 FAM72AQ5TYM5 149 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms