RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 Q9UFV3 132 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 INTUQ9ULD6 942 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 OAZ3Q9UMX2 235 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 KIAA1671Q9BY89 1806 aa6.13□□□□□ -1.43
AP3S1-202ENST00000395548 SPAARA0A1B0GVQ0 90 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 LNP1A1A4G5 178 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 PLD2O14939 933 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 RPP40O75818 363 aaKnown RBP6.12□□□□□ -1.43
AP3S1-202ENST00000395548 AKAP3O75969 853 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 ARIH2O95376 493 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 CAVIN2O95810 425 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 CHRNA1P02708 482 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 RPLP2P05387 115 aaKnown RBP6.12□□□□□ -1.43
AP3S1-202ENST00000395548 C6P13671 934 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 EDNRBP24530 442 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 HOXC8P31273 242 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 IL12RB1P42701 662 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 MEOX1P50221 254 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 CD83Q01151 205 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 SATB1Q01826 763 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 PRKD1Q15139 912 aaPredicted RBP6.12□□□□□ -1.43
AP3S1-202ENST00000395548 LY6KQ17RY6 165 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 TMEM177Q53S58 311 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 MUM1L1Q5H9M0 696 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 KANK2Q63ZY3 851 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 TRIM68Q6AZZ1 485 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 GRAMD4Q6IC98 578 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 TCEAL6Q6IPX3 200 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 USP30Q70CQ3 517 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 PCGF5Q86SE9 256 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 DDX53Q86TM3 631 aaKnown RBP6.12□□□□□ -1.43
AP3S1-202ENST00000395548 FAM160B2Q86V87 743 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 SPEM1Q8N4L4 309 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 MIGA1Q8NAN2 632 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 PHKBQ93100 1093 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 TCEAL3Q969E4 200 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 ASPSCR1Q9BZE9 553 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 C12orf65Q9H3J6 166 aaKnown RBP6.12□□□□□ -1.43
AP3S1-202ENST00000395548 TRIM39Q9HCM9 518 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 CDC42EP3Q9UKI2 254 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 MAPRE3Q9UPY8 281 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 SQORQ9Y6N5 450 aa6.12□□□□□ -1.43
AP3S1-202ENST00000395548 E2F8A0AVK6 867 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 PTPDC1A2A3K4 754 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 GOLGA6L22H0YM25 854 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 CDC14BO60729 498 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 RFPL3O75679 317 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 SMIM10L2AP0DMW4 78 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 SMIM10L2BP0DMW5 78 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 CCDC192P0DO97 292 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 TACR2P21452 398 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 COMTP21964 271 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 ELAVL4P26378 380 aaKnown RBP6.11□□□□□ -1.43
AP3S1-202ENST00000395548 MAN1A1P33908 653 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 GATMP50440 423 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 STAT2P52630 851 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 IRF9Q00978 393 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 IKQ13123 557 aaPredicted RBP6.11□□□□□ -1.43
AP3S1-202ENST00000395548 MLC1Q15049 377 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 ELF2Q15723 593 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 GFOD2Q3B7J2 385 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 FBXO47Q5MNV8 452 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 TMEM200BQ69YZ2 307 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 TAF2Q6P1X5 1199 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 PDXDC1Q6P996 788 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 FGD2Q7Z6J4 655 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 KBTBD6Q86V97 674 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 ADAMTS14Q8WXS8 1223 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 E2F7Q96AV8 911 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 ZC3H10Q96K80 434 aaKnown RBP6.11□□□□□ -1.43
AP3S1-202ENST00000395548 ADOQ96SZ5 270 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 BOCQ9BWV1 1114 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 CRNKL1Q9BZJ0 848 aaKnown RBP6.11□□□□□ -1.43
AP3S1-202ENST00000395548 VPS11Q9H270 941 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 RNPEPQ9H4A4 650 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 CWH43Q9H720 699 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 PPCSQ9HAB8 311 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 LMAN1LQ9HAT1 526 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 AASDHPPTQ9NRN7 309 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 MAP3K20Q9NYL2 800 aaKnown RBP6.11□□□□□ -1.43
AP3S1-202ENST00000395548 NYAP2Q9P242 653 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 NDRG2Q9UN36 371 aaKnown RBP6.11□□□□□ -1.43
AP3S1-202ENST00000395548 DOPEY2Q9Y3R5 2298 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 NAV1Q8NEY1 1877 aa6.11□□□□□ -1.43
AP3S1-202ENST00000395548 CCDC195A0A1B0GUA6 201 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 CDX4O14627 284 aaPredicted RBP6.1□□□□□ -1.43
AP3S1-202ENST00000395548 TBX3O15119 743 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 AKAP8O43823 692 aaKnown RBP6.1□□□□□ -1.43
AP3S1-202ENST00000395548 RHOBTB1O94844 696 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 FSHBP01225 129 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 IFIT2P09913 472 aaKnown RBP6.1□□□□□ -1.43
AP3S1-202ENST00000395548 KLRC2P26717 231 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 APEX1P27695 318 aaKnown RBP6.1□□□□□ -1.43
AP3S1-202ENST00000395548 RPS19P39019 145 aaKnown RBP6.1□□□□□ -1.43
AP3S1-202ENST00000395548 GDF5P43026 501 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 POLGP54098 1239 aaPredicted RBP6.1□□□□□ -1.43
AP3S1-202ENST00000395548 ATP8B2P98198 1209 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 CREB5Q02930 508 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 ITKQ08881 620 aa6.1□□□□□ -1.43
AP3S1-202ENST00000395548 LMAN2Q12907 356 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms