RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PACSIN1Q9BY11 444 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 PDGFDQ9GZP0 370 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 WHRNQ9P202 907 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 MAP10Q9P2G4 905 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CTNNAL1Q9UBT7 734 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 VANGL2Q9ULK5 521 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ERVK-9P63128 1117 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ERVK-24P63145 666 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 TRAPPC12Q8WVT3 735 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 AHCYL2Q96HN2 611 aaKnown RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 SENP6Q9GZR1 1112 aaPredicted RBP10.68□□□□□ -0.7
COL4A6-203ENST00000394872 TMCC3Q9ULS5 477 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 SHMT1P34896 483 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 SLC39A12Q504Y0 691 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 TAF2Q6P1X5 1199 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 CCT7Q99832 543 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 MFSD1Q9H3U5 465 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 RIOX1Q9H6W3 641 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 ATP13A1Q9HD20 1204 aa10.68□□□□□ -0.7
COL4A6-203ENST00000394872 NRXN1Q9ULB1 1477 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 F8VZ95 297 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 M0R3G1 203 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 WNT10BO00744 389 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 XPO1O14980 1071 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 NCAM2O15394 837 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 KIF1CO43896 1103 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 SERPINI2O75830 405 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CYP2A7P20853 494 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ALDH9A1P49189 494 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 MTA1Q13330 715 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 RETSATQ6NUM9 610 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 FAM180AQ6UWF9 173 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 FAM9CQ8IZT9 166 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 MDM1Q8TC05 714 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 PIK3R5Q8WYR1 880 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 NLNQ9BYT8 704 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 MIEF1Q9NQG6 463 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 COPG1Q9Y678 874 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 PDZK1P1A8MUH7 402 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 TOMM70O94826 608 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 RBP1P09455 135 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 TUBP50607 506 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 HIRAP54198 1017 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 EPS8L3Q8TE67 593 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 SPIRE2Q8WWL2 714 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CNBD2Q96M20 576 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 IL25Q9H293 177 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ELOVL6Q9H5J4 265 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ZNF711Q9Y462 761 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 SNX8Q9Y5X2 465 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 LMTK2Q8IWU2 1503 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CCNT2O60583 730 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 PROSCO94903 275 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ADCYAP1R1P41586 468 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 NFYCQ13952 458 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CBWD3Q5JTY5 395 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CBWD5Q5RIA9 395 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 USP50Q70EL3 339 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ZNF410Q86VK4 478 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 TATDN2Q93075 761 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ACOX2Q99424 681 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 PHTF1Q9UMS5 762 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 DIP2CQ9Y2E4 1556 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 RBAK-RBAKDNI3L0D1 243 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 NR5A2O00482 541 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ZW10O43264 779 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 MAPTP10636 758 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 OAZ1P54368 228 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 NLRP9Q7RTR0 991 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 LGI2Q8N0V4 545 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 SKA1Q96BD8 255 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 RAD54BQ9Y620 910 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 ERI2A8K979 691 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 LACTBL1A8MY62 500 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 TPST1O60507 370 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 SERPINF2P08697 491 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 BEX3Q00994 111 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 PRKAA1Q13131 559 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 POU6F1Q14863 301 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 TMEM154Q6P9G4 183 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CACUL1Q86Y37 369 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 GFM2Q969S9 779 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 PPP1R10Q96QC0 940 aaKnown RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 NAT9Q9BTE0 207 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 DMAP1Q9NPF5 467 aaPredicted RBP10.67□□□□□ -0.7
COL4A6-203ENST00000394872 GPRC5DQ9NZD1 345 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 TUBGCP4Q9UGJ1 667 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 FZD1Q9UP38 647 aa10.67□□□□□ -0.7
COL4A6-203ENST00000394872 CCT8L1PA6NM43 557 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 TRIM66O15016 1216 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 GSTM1P09488 218 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 GZMAP12544 262 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 PTPN3P26045 913 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 CNTFP26441 200 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 TARSP26639 723 aaKnown RBP10.66□□□□□ -0.7
COL4A6-203ENST00000394872 SV2AQ7L0J3 742 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 C3orf20Q8ND61 904 aa10.66□□□□□ -0.7
COL4A6-203ENST00000394872 TRPC4Q9UBN4 977 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms