RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 SORCS3Q9UPU3 1222 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 TOMM70O94826 608 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 TMEM63AO94886 807 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ERBB2P04626 1255 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF484Q5JVG2 852 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 RWDD4Q6NW29 188 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 NET1Q7Z628 596 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ALYREFQ86V81 257 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 XYLT1Q86Y38 959 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SH3TC2Q8TF17 1288 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 CPB2Q96IY4 423 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 PPP1R36Q96LQ0 422 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 MECRQ9BV79 373 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 MRPL40Q9NQ50 206 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ADA2Q9NZK5 511 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 MAFBQ9Y5Q3 323 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 GMNNO75496 209 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 CD48P09326 243 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ENO3P13929 434 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 CPA3P15088 417 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 PAMP19021 973 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 KCNA4P22459 653 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 NR2C2P49116 596 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 KRT72Q14CN4 511 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 EEF1DP3Q658K8 133 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 KLC3Q6P597 504 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 FAM183BPQ6ZVS7 135 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SETD3Q86TU7 594 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 FAM131BQ86XD5 332 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 POU5F2Q8N7G0 328 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 NAT8LQ8N9F0 302 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 COLGALT1Q8NBJ5 622 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 MTMR14Q8NCE2 650 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 PIWIL2Q8TC59 973 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 PPP2R3CQ969Q6 453 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 CADM1Q9BY67 442 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 NIFKQ9BYG3 293 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SPATC1LQ9H0A9 340 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 UPF3AQ9H1J1 476 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 TASP1Q9H6P5 420 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 TNFSF13BQ9Y275 285 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 MEI4A8MW99 385 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 B4GALT4O60513 344 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SERPINB8P50452 374 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 BCAT1P54687 386 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC6A3Q01959 620 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 PDPK2PQ6A1A2 396 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 APPL2Q8NEU8 664 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SNRNP25Q9BV90 132 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 CLEC11AQ9Y240 323 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF541Q9H0D2 1346 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 WDR27A2RRH5 827 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 TPD52P55327 224 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 BIRC2Q13490 618 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 ARCQ7LC44 396 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 FBXO16Q8IX29 292 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 HTR3CQ8WXA8 447 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 VPS39Q96JC1 886 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF570Q96NI8 536 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 LRRC40Q9H9A6 602 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 C20orf96Q9NUD7 363 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 IL1RAPL1Q9NZN1 696 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 LNPEPQ9UIQ6 1025 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 NPTXRO95502 500 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 PGK2P07205 417 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 GP5P40197 560 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 GPX6P59796 221 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 USP10Q14694 798 aaKnown RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 C9orf131Q5VYM1 1079 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 C16orf46Q6P387 395 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 ZDHHC17Q8IUH5 632 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 TRIML2Q8N7C3 387 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 EPAS1Q99814 870 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 EBNA1BP2Q99848 306 aaKnown RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 ILKAPQ9H0C8 392 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 PLLPQ9Y342 182 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 AP3B1O00203 1094 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 CD4P01730 458 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 GNL1P36915 607 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 HIRAP54198 1017 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 OGDHQ02218 1023 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 ITGA9Q13797 1035 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 UGP2Q16851 508 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 KHDC1Q4VXA5 237 aaKnown RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 C15orf39Q6ZRI6 1047 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 RIPOR1Q6ZS17 1223 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 DEFB107AQ8IZN7 70 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 TTC16Q8NEE8 873 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 ELP3Q9H9T3 547 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 CPSF3Q9UKF6 684 aaKnown RBP12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 DTNAQ9Y4J8 743 aa12.03□□□□□ -0.48
UBE2D3-209ENST00000394804 FARP2O94887 1054 aaPredicted RBP12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 VTNP04004 478 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 NUDT2P50583 147 aa12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 YWHAZP63104 245 aaKnown RBP12.02□□□□□ -0.48
UBE2D3-209ENST00000394804 AMHR2Q16671 573 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms