RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 GLIS2Q9BZE0 524 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 TASP1Q9H6P5 420 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 GPBP1L1Q9HC44 474 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 KRT82Q9NSB4 513 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 SCHIP1Q9P0W5 487 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 A0A0B4J269 797 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 SRRM3A6NNA2 597 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 TPD52L2O43399 206 aaKnown RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 NPTXRO95502 500 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 RCOR2Q8IZ40 523 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TMC2Q8TDI7 906 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 GIPC3Q8TF64 312 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 CAB39LQ9H9S4 337 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 KLHL8Q9P2G9 620 aaPredicted RBP9.11□□□□□ -0.95
RTN4-206ENST00000394611 ZNF212Q9UDV6 495 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 TBX20Q9UMR3 447 aa9.11□□□□□ -0.95
RTN4-206ENST00000394611 NCANO14594 1321 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 LIASO43766 372 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ZBTB11O95625 1053 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 PSMC3P17980 439 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ADORA2BP29275 332 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ALDH1A3P47895 512 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 GSSP48637 474 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 MYL6P60660 151 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 DAB2P98082 770 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 RALGDSQ12967 914 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 MADCAM1Q13477 382 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 GK3PQ14409 553 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ANKRD20A4Q4UJ75 823 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 TRMT10BQ6PF06 316 aaKnown RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 ARMCX6Q7L4S7 300 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 PID1Q7Z2X4 250 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 NANOGNBQ7Z5D8 188 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 FAM151AQ8WW52 585 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 KLHL25Q9H0H3 589 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 TMEM8AQ9HCN3 771 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 SELENONQ9NZV5 590 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 STX18Q9P2W9 335 aaKnown RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 BCAP29Q9UHQ4 241 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 AP4B1Q9Y6B7 739 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 TTLL13PA6NNM8 815 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 H3BSA7 217 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 KCNK1O00180 336 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ENTPD3O75355 529 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 FDX1P10109 184 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ERVK-10P10266 1014 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 LCP1P13796 627 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 RBL1P28749 1068 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 HDAC4P56524 1084 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 SPDYAQ5MJ70 313 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 NBPF12Q5TAG4 269 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 CHST15Q7LFX5 561 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 ZNF606Q8WXB4 792 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ZNF669Q96BR6 464 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 CCDC17Q96LX7 622 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 P2RX7Q99572 595 aaKnown RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 OMDQ99983 421 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 FERMT1Q9BQL6 677 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 CCDC167Q9P0B6 97 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ATXN10Q9UBB4 475 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 MROH7Q68CQ1 1323 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 J3QRK9 145 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 GMNNO75496 209 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 TMEM63AO94886 807 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 CLIC3O95833 236 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 TNNC2P02585 160 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 MAGEA10P43363 369 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 CHN2P52757 468 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 UGCGQ16739 394 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ZIK1Q3SY52 487 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 GALNTL6Q49A17 601 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 HEATR6Q6AI08 1181 aaKnown RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 TTC33Q6PID6 262 aaPredicted RBP9.1□□□□□ -0.95
RTN4-206ENST00000394611 PRR23BQ6ZRT6 265 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 CDHR3Q6ZTQ4 885 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 PLEKHO2Q8TD55 490 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 AZIN2Q96A70 460 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 FBXL8Q96CD0 374 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 TAAR1Q96RJ0 339 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 SERPINI1Q99574 410 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 CIB1Q99828 191 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 PCDHA2Q9Y5H9 948 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 FRMPD4Q14CM0 1322 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 ADGRA3Q8IWK6 1321 aa9.1□□□□□ -0.95
RTN4-206ENST00000394611 WDR27A2RRH5 827 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 ITGA2BP08514 1039 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 PDGFRBP09619 1106 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 GZMAP12544 262 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 SLC1A6P48664 564 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 ITGADQ13349 1161 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 MAMLD1Q13495 774 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 NADK2Q4G0N4 442 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 PPM1LQ5SGD2 360 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 TMEM198Q66K66 360 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 KIAA2013Q8IYS2 634 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 APOPT1Q96IL0 206 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 TEPSINQ96N21 525 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 KCNMB3Q9NPA1 279 aa9.09□□□□□ -0.95
RTN4-206ENST00000394611 AFG3L2Q9Y4W6 797 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms