RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TMEM206Q9H813 350 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SNTNA6NMZ2 147 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CIAO1O76071 339 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CDH1P12830 882 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 XRCC1P18887 633 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 ETV4P43268 484 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 RAD23AP54725 363 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CREB5Q02930 508 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CHRNEQ04844 493 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 VPS72Q15906 364 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 LRIT3Q3SXY7 679 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM47CQ5HY64 1035 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CCDC33Q8N5R6 958 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 BHLHE22Q8NFJ8 381 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM89AQ96GI7 184 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SCUBE2Q9NQ36 999 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 ANGPTL3Q9Y5C1 460 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SLIT3O75094 1523 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 PKD1L3Q7Z443 1732 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 LMTK3Q96Q04 1460 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 IDH3BO43837 385 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 LYPLA1O75608 230 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 MFN2O95140 757 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CLIC3O95833 236 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 MAGP20916 626 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 VWA5B1Q5TIE3 1220 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SIX6OS1Q8N1H7 587 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 LSM14AQ8ND56 463 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 FAM156AQ8NDB6 213 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 ADCY4Q8NFM4 1077 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 OMA1Q96E52 524 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CIB1Q99828 191 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 MTG1Q9BT17 334 aaPredicted RBP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC13A1Q9BZW2 595 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 RWDD3Q9Y3V2 267 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SPEF2Q9C093 1822 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 AIM2O14862 343 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 FSCN2O14926 492 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 SNPHO15079 494 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 RNASEH2AO75792 299 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 BCL10O95999 233 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 AOC1P19801 751 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 GNG2P59768 71 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ECT2LQ008S8 904 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC13A2Q13183 592 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 DLG2Q15700 870 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF564Q8TBZ8 553 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 PEX13Q92968 403 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 VCPIP1Q96JH7 1222 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 PSKH2Q96QS6 385 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 DHRS9Q9BPW9 319 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 NPLQ9BXD5 320 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF717Q9BY31 904 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 IMPG2Q9BZV3 1241 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 PIK3C2AO00443 1686 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 AFDNP55196 1824 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 SDR42E2A6NKP2 422 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 E9PMD0 336 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 FOXN3O00409 490 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 RGS13O14921 159 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 NDUFS2O75306 463 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ALX3O95076 343 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 YAP1P46937 504 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 GPC5P78333 572 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 DLG4P78352 724 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 MGAT5BQ3V5L5 792 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 CYP20A1Q6UW02 462 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC22A16Q86VW1 577 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 CCDC89Q8N998 374 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ZUFSPQ96AP4 578 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF641Q96N77 438 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 INO80BQ9C086 356 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 PNPLA3Q9NST1 481 aa12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ABI2Q9NYB9 513 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF330Q9Y3S2 320 aaPredicted RBP12.91□□□□□ -0.34
SLC28A1-203ENST00000394573 NFAT5O94916 1531 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 SYCE1LA8MT33 242 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 CENPBD1B2RD01 187 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 HAT1O14929 419 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 TSPAN1O60635 241 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 TOP3BO95985 862 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 RALAP11233 206 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 KRT5P13647 590 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 AKR1B1P15121 316 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF26P17031 533 aaPredicted RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 KRT6CP48668 564 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 GPS1Q13098 491 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 MAPRE1Q15691 268 aaKnown RBP12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 NPTX1Q15818 432 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC9A4Q6AI14 798 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 ATG14Q6ZNE5 492 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 CARM1Q86X55 608 aa12.9□□□□□ -0.34
SLC28A1-203ENST00000394573 CRLF3Q8IUI8 442 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms