RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 KCNK13Q9HB14 408 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 PFDN4Q9NQP4 134 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 GPATCH2LQ9NWQ4 482 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 SMG5Q9UPR3 1016 aaKnown RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 LCTP09848 1927 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 PRPF4O43172 522 aaKnown RBP eCLIP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 HCRTO43612 131 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 PIGRP01833 764 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ERBB2P04626 1255 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 CCDC166P0CW27 439 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 VCLP18206 1134 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 CRABP2P29373 138 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 POLR2BP30876 1174 aaKnown RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 OTUD4Q01804 1114 aaKnown RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 MSLNQ13421 630 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 C15orf59Q2T9L4 293 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 SLC44A4Q53GD3 710 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 GLRA4Q5JXX5 417 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ANKRD22Q5VYY1 191 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 FBXL19Q6PCT2 694 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 IYDQ6PHW0 289 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ZPBP2Q6X784 338 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 TRIM72Q6ZMU5 477 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ACAD11Q709F0 780 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ARHGAP24Q8N264 748 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ARFGAP1Q8N6T3 406 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 C1orf127Q8N9H9 656 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ZBTB8BQ8NAP8 495 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 NETO2Q8NC67 525 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ACTL9Q8TC94 416 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 GDPD5Q8WTR4 605 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 CATSPER2Q96P56 530 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 FAM111AQ96PZ2 611 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 XYLT2Q9H1B5 865 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 CYP4F11Q9HBI6 524 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 FAM49BQ9NUQ9 324 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 SIX4Q9UIU6 781 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ADAMTS6Q9UKP5 1117 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 PACSIN3Q9UKS6 424 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 PAIP2BQ9ULR5 123 aaKnown RBP10.32□□□□□ -0.76
PSEN1-204ENST00000394164 ACTL7BQ9Y614 415 aa10.32□□□□□ -0.76
PSEN1-204ENST00000394164 TYROBPO43914 113 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TRPA1O75762 1119 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TCEA3O75764 348 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 CALB1P05937 261 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 SSTR1P30872 391 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 IREB2P48200 963 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 SLC25A3Q00325 362 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 GK3PQ14409 553 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 MXD4Q14582 209 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 NADK2Q4G0N4 442 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 DNAJC14Q6Y2X3 702 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 B3GNT6Q6ZMB0 384 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 PRPF39Q86UA1 669 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 RFX6Q8HWS3 928 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 POU5F2Q8N7G0 328 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 FAM71DQ8N9W8 422 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 KCTD6Q8NC69 237 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 AFG1LQ8WV93 481 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 SKA1Q96BD8 255 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 USP29Q9HBJ7 922 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 BUD23O43709 281 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 HNRNPCL1O60812 293 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 VARSP26640 1264 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 ZNF132P52740 706 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 BASP1P80723 227 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 PDE1BQ01064 536 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 UBAP2LQ14157 1087 aaKnown RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TFDP1Q14186 410 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 FAM102AQ5T9C2 384 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-204ENST00000394164 MFSD4BQ5TF39 518 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 FAXCQ5TGI0 409 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 KLC3Q6P597 504 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 C1orf228Q6PIY5 440 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 RNF111Q6ZNA4 994 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 PDSS2Q86YH6 399 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 RCOR2Q8IZ40 523 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 MECRQ9BV79 373 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 ELOVL4Q9GZR5 314 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 MAF1Q9H063 256 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 IL1RAPL1Q9NZN1 696 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 DOLKQ9UPQ8 538 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 GMEB1Q9Y692 573 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 C15orf38-AP3S2A0A0A6YYH1 394 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TCRBV7S3A2A0A539 114 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 A8MXQ7 604 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 ACKR2O00590 384 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 LRCH4O75427 683 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TFPTP0C1Z6 253 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 EDNRBP24530 442 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 KLRC2P26717 231 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 ADCYAP1R1P41586 468 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 PSMD7P51665 324 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 PEX6Q13608 980 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 KIZQ2M2Z5 673 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TFDP3Q5H9I0 405 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 TSHZ1Q6ZSZ6 1077 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 ARPINQ7Z6K5 226 aa10.31□□□□□ -0.76
PSEN1-204ENST00000394164 METTL25Q8N6Q8 603 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms