RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 KCNC3Q14003 757 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 ELMSAN1Q6PJG2 1045 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 KATNAL2Q8IYT4 538 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 CCDC185Q8N715 623 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 PPP2R3CQ969Q6 453 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 OLA1Q9NTK5 396 aaKnown RBP25.27■■□□□ 1.64
LRFN4-202ENST00000393952 ZDHHC7Q9NXF8 308 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 CDC23Q9UJX2 597 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 DENND4CQ5VZ89 1909 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 CDH23Q9H251 3354 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 KRT1P04264 644 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 RARAP10276 462 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 GABRR2P28476 465 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 GBP1P32455 592 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 PPP3CCP48454 512 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 EIF4EBP2Q13542 120 aaPredicted RBP25.27■■□□□ 1.64
LRFN4-202ENST00000393952 TCEAL5Q5H9L2 206 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 HECTD3Q5T447 861 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 ZFYVE27Q5T4F4 411 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 AADACL2Q6P093 401 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 GAREM2Q75VX8 874 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 HSPH1Q92598 858 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 PBKQ96KB5 322 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 CAPZA3Q96KX2 299 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 SNRNP25Q9BV90 132 aaKnown RBP25.27■■□□□ 1.64
LRFN4-202ENST00000393952 CARD9Q9H257 536 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 ASAH2Q9NR71 780 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 GPATCH2LQ9NWQ4 482 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 RASAL2Q9UJF2 1139 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 MRFAP1Q9Y605 127 aa25.27■■□□□ 1.64
LRFN4-202ENST00000393952 PI4K2BG5E9Z4 385 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 CEP104O60308 925 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 PYGMP11217 842 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 MYL4P12829 197 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 CXCR3P49682 368 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 HYAL1Q12794 435 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 ZNF276Q8N554 614 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 C12orf76Q8N812 135 aaPredicted RBP25.26■■□□□ 1.63
LRFN4-202ENST00000393952 SERPINB11Q96P15 392 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 PRKD2Q9BZL6 878 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 DDX56Q9NY93 547 aaKnown RBP25.26■■□□□ 1.63
LRFN4-202ENST00000393952 MARCH2Q9P0N8 246 aa25.26■■□□□ 1.63
LRFN4-202ENST00000393952 CCDC195A0A1B0GUA6 201 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 C2orf78A6NCI8 922 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 XYLBO75191 536 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 PABPC1LQ4VXU2 614 aaKnown RBP25.25■■□□□ 1.63
LRFN4-202ENST00000393952 BOLA3Q53S33 107 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 SND1Q7KZF4 910 aaKnown RBP eCLIP25.25■■□□□ 1.63
LRFN4-202ENST00000393952 MIB1Q86YT6 1006 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 TEKT4Q8WW24 435 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 RAPGEF5Q92565 580 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 ZNF707Q96C28 371 aaPredicted RBP25.25■■□□□ 1.63
LRFN4-202ENST00000393952 MS4A14Q96JA4 679 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 CDK5RAP1Q96SZ6 601 aaKnown RBP25.25■■□□□ 1.63
LRFN4-202ENST00000393952 TMPRSS4Q9NRS4 437 aa25.25■■□□□ 1.63
LRFN4-202ENST00000393952 DNMT3BQ9UBC3 853 aaKnown RBP25.25■■□□□ 1.63
LRFN4-202ENST00000393952 TMEM265A0A087WTH1 108 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 CES2O00748 559 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 NRG2O14511 850 aaPredicted RBP25.24■■□□□ 1.63
LRFN4-202ENST00000393952 PTPN2P17706 415 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 TUBP50607 506 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 GRIN2CQ14957 1233 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 ZC3H12AQ5D1E8 599 aaKnown RBP25.24■■□□□ 1.63
LRFN4-202ENST00000393952 ERMARDQ5T6L9 678 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 CREG2Q8IUH2 290 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 EXD1Q8NHP7 514 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 RNF34Q969K3 372 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 RNF25Q96BH1 459 aaPredicted RBP25.24■■□□□ 1.63
LRFN4-202ENST00000393952 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.24■■□□□ 1.63
LRFN4-202ENST00000393952 SMARCAL1Q9NZC9 954 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 NOTCH4Q99466 2003 aa25.24■■□□□ 1.63
LRFN4-202ENST00000393952 LRRD1A4D1F6 860 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 SOX1O00570 391 aaPredicted RBP25.23■■□□□ 1.63
LRFN4-202ENST00000393952 COCHO43405 550 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 OAS1P00973 400 aaKnown RBP25.23■■□□□ 1.63
LRFN4-202ENST00000393952 EPHA5P54756 1037 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 CYP4F8P98187 520 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 TUBB2AQ13885 445 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 CA9Q16790 459 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 TADA2BQ86TJ2 420 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 CMASQ8NFW8 434 aaPredicted RBP25.23■■□□□ 1.63
LRFN4-202ENST00000393952 TUBB2BQ9BVA1 445 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 MAGEB5Q9BZ81 275 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 WDCPQ9H6R7 721 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 ANLNQ9NQW6 1124 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 FZD10Q9ULW2 581 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 AP4E1Q9UPM8 1137 aa25.23■■□□□ 1.63
LRFN4-202ENST00000393952 PRRC2BQ5JSZ5 2229 aaKnown RBP25.23■■□□□ 1.63
LRFN4-202ENST00000393952 A0A1W2PRU2 124 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 SLC12A8A0AV02 714 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 ZRANB2O95218 330 aaKnown RBP eCLIP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 GLP2RO95838 553 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 RHOP08100 348 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 POU2F2P09086 479 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 GJA1P17302 382 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 CDC25CP30307 473 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 ATP5C1P36542 298 aaKnown RBP25.22■■□□□ 1.63
LRFN4-202ENST00000393952 CCR2P41597 374 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 SEL1L2Q5TEA6 688 aa25.22■■□□□ 1.63
LRFN4-202ENST00000393952 MFSD7Q6UXD7 560 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms