RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 NFE2L3Q9Y4A8 694 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 STON1Q9Y6Q2 735 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
CHMP3-202ENST00000393773 A0A1W2PQH9 124 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 MEI4A8MW99 385 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 KCNJ18B7U540 433 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 STX6O43752 255 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 STC2O76061 302 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 YEATS4O95619 227 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 ASS1P00966 412 aaKnown RBP16.19■□□□□ 0.18
CHMP3-202ENST00000393773 GNSP15586 552 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 ADORA2BP29275 332 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 INCA1Q0VD86 236 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 WDR45BQ5MNZ6 344 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 SPOPLQ6IQ16 392 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 GLRX5Q86SX6 157 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 ZCCHC9Q8N567 271 aaKnown RBP16.19■□□□□ 0.18
CHMP3-202ENST00000393773 PNPLA1Q8N8W4 532 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 BAHD1Q8TBE0 780 aaPredicted RBP16.19■□□□□ 0.18
CHMP3-202ENST00000393773 TMEM174Q8WUU8 243 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 JAKMIP2Q96AA8 810 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 TOE1Q96GM8 510 aaKnown RBP16.19■□□□□ 0.18
CHMP3-202ENST00000393773 ZDHHC5Q9C0B5 715 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 PRDM16Q9HAZ2 1276 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 PNPLA8Q9NP80 782 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 DMAC2Q9NW81 257 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 NUDT5Q9UKK9 219 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 PCOLCE2Q9UKZ9 415 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 PCDHA5Q9Y5H7 936 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 CABIN1Q9Y6J0 2220 aa16.19■□□□□ 0.18
CHMP3-202ENST00000393773 KNL1Q8NG31 2342 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 A0A1B0GTW7 788 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 PVALEFA0A1B0GWK0 134 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 KLKB1P03952 638 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 NCAM1P13591 858 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 RARGP13631 454 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 P4HA1P13674 534 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 ACO1P21399 889 aaKnown RBP16.18■□□□□ 0.18
CHMP3-202ENST00000393773 IL12RB1P42701 662 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 MFAP3P55082 362 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 BNC1Q01954 994 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 CUL4BQ13620 913 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 GEN1Q17RS7 908 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 C1orf220Q5T0J3 134 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 FYB2Q5VWT5 728 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 CCNI2Q6ZMN8 369 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-202ENST00000393773 SLC9A9Q8IVB4 645 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 RBBP8NLQ8NC74 664 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-202ENST00000393773 KIAA0895Q8NCT3 520 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 GOLGA5Q8TBA6 731 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 HNRNPABQ99729 332 aaKnown RBP16.18■□□□□ 0.18
CHMP3-202ENST00000393773 BACH2Q9BYV9 841 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 IL21RQ9HBE5 538 aa16.18■□□□□ 0.18
CHMP3-202ENST00000393773 THAP10Q9P2Z0 257 aaPredicted RBP16.18■□□□□ 0.18
CHMP3-202ENST00000393773 POLR2DO15514 142 aaKnown RBP16.17■□□□□ 0.18
CHMP3-202ENST00000393773 KLRC4O43908 158 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 IGLV3-19P01714 112 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 ZNF883P0CG24 379 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 STARD3Q14849 445 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 SGSM1Q2NKQ1 1148 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 C10orf120Q5SQS8 335 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 CCDC186Q7Z3E2 898 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 SCD5Q86SK9 330 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 SLCO6A1Q86UG4 719 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 GRAMD1CQ8IYS0 662 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 CADM4Q8NFZ8 388 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 TAF4BQ92750 862 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 GPR174Q9BXC1 333 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 KCTD10Q9H3F6 313 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 ITM2CQ9NQX7 267 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 DNMT3LQ9UJW3 386 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 FNDC3AQ9Y2H6 1198 aaKnown RBP16.17■□□□□ 0.18
CHMP3-202ENST00000393773 PCDHB9Q9Y5E1 797 aa16.17■□□□□ 0.18
CHMP3-202ENST00000393773 NPC1O15118 1278 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 RPN1P04843 607 aaKnown RBP16.16■□□□□ 0.18
CHMP3-202ENST00000393773 PIK3CAP42336 1068 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 PLA2G4AP47712 749 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 TPMTP51580 245 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 KIF11P52732 1056 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 ZNF132P52740 706 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 COPAP53621 1224 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 DCAF12L1Q5VU92 463 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 C19orf48Q6RUI8 117 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 ZNF276Q8N554 614 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 C1orf216Q8TAB5 229 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 PIWIL1Q96J94 861 aaKnown RBP16.16■□□□□ 0.18
CHMP3-202ENST00000393773 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 TOR4AQ9NXH8 423 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 NAGPAQ9UK23 515 aa16.16■□□□□ 0.18
CHMP3-202ENST00000393773 APOBEC2Q9Y235 224 aaKnown RBP16.16■□□□□ 0.18
CHMP3-202ENST00000393773 GOLGA4Q13439 2230 aaKnown RBP16.15■□□□□ 0.18
CHMP3-202ENST00000393773 SETXQ7Z333 2677 aaKnown RBP16.15■□□□□ 0.18
CHMP3-202ENST00000393773 KALRNO60229 2985 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 COL5A1P20908 1838 aaPredicted RBP16.15■□□□□ 0.18
CHMP3-202ENST00000393773 CILPO75339 1184 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 DKK1O94907 266 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 CER1O95813 267 aa16.15■□□□□ 0.18
CHMP3-202ENST00000393773 HLA-DRAP01903 254 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms