RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 HARS2P49590 506 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 VCPP55072 806 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 TAF5Q15542 800 aa19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 TRIP4Q15650 581 aaPredicted RBP19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 RHBDF2Q6PJF5 856 aa19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 TXNDC11Q6PKC3 985 aa19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 Q6ZNB5 142 aa19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 TMEM105Q8N8V8 129 aa19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 NUCKS1Q9H1E3 243 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 SEPT11Q9NVA2 429 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-204ENST00000393546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.83■□□□□ 0.774e-7■□□□□ 9.2
PDLIM7-204ENST00000393546 HSF2BPO75031 334 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 DCNP07585 359 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 TNFAIP3P21580 790 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 PON2Q15165 354 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 LY6G5CQ5SRR4 150 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 SYPL2Q5VXT5 272 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 OLFML1Q6UWY5 402 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 SLC26A9Q7LBE3 791 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 DQX1Q8TE96 717 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 CPLX3Q8WVH0 158 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 SERPINB11Q96P15 392 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 PCDHB18PQ96TA0 734 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 SPHK2Q9NRA0 654 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 CAPN11Q9UMQ6 739 aa19.82■□□□□ 0.76
PDLIM7-204ENST00000393546 COL4A3Q01955 1670 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 ITIH6Q6UXX5 1313 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 FAM170AA1A519 330 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 TRDMT1O14717 391 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 GRAP2O75791 330 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 KLKB1P03952 638 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 ADH5P11766 374 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 UNGP13051 313 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 CHKAP35790 457 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 NSFP46459 744 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 GALK1P51570 392 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 TBX4P57082 545 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 CDK17Q00537 523 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 GAD2Q05329 585 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 CLEC16AQ2KHT3 1053 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 DCAF6Q58WW2 860 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 DENND1CQ8IV53 801 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 UNC45BQ8IWX7 931 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 CCDC105Q8IYK2 499 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 DEFB106AQ8N104 65 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 SLC30A5Q8TAD4 765 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 PIWIL1Q96J94 861 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 SLC2A13Q96QE2 648 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 P2RY13Q9BPV8 354 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 ANP32EQ9BTT0 268 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 LMAN1LQ9HAT1 526 aa19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 AGO1Q9UL18 857 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 LUC7L2Q9Y383 392 aaKnown RBP19.81■□□□□ 0.76
PDLIM7-204ENST00000393546 MYOFQ9NZM1 2061 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 MSI1O43347 362 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 MMP8P22894 467 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 SCNN1AP37088 669 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 MAGEA9P43362 315 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 NUBP1P53384 320 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 ZBED6P86452 979 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 RING1Q06587 406 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 KLHL30Q0D2K2 578 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 GRSF1Q12849 480 aaKnown RBP eCLIP19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 NNTQ13423 1086 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 LRRC32Q14392 662 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 ANO4Q32M45 955 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 DGKKQ5KSL6 1271 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 XYLT1Q86Y38 959 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 TMEM25Q86YD3 366 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 ZNF687Q8N1G0 1237 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 CD101Q93033 1021 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 CLDN23Q96B33 292 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 HAUS4Q9H6D7 363 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 WDR35Q9P2L0 1181 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 TLR6Q9Y2C9 796 aa19.8■□□□□ 0.76
PDLIM7-204ENST00000393546 MIA3Q5JRA6 1907 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 TRUB2O95900 331 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 CHRNB1P11230 501 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 GBP1P32455 592 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 NOS2P35228 1153 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 PRKCIP41743 596 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 RNASE9P60153 205 aaKnown RBP19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 CENPCQ03188 943 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 FZD5Q13467 585 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 C2CD6Q53TS8 623 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 TMEM196Q5HYL7 178 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 FAM102AQ5T9C2 384 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 NUGGCQ68CJ6 796 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 SPECC1LQ69YQ0 1117 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 MMS22LQ6ZRQ5 1243 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 TPGS1Q6ZTW0 290 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 DTWD2Q8NBA8 298 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 ADAM32Q8TC27 787 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 SYN2Q92777 582 aaPredicted RBP19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 CHFRQ96EP1 664 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 RBSNQ9H1K0 784 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 RRN3Q9NYV6 651 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 ADAM22Q9P0K1 906 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 DLGAP2Q9P1A6 1054 aa19.79■□□□□ 0.76
PDLIM7-204ENST00000393546 GOLGA8SH3BPF8 625 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms