RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 TRIB2Q92519 343 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 CYTH2Q99418 400 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 MFHAS1Q9Y4C4 1052 aa26.55■■□□□ 1.84
SMARCD3-203ENST00000392811 TCRBV9S1A1TA0A576 114 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 THP07101 528 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 CA4P22748 312 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 CLCNKBP51801 687 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 MAP3K7CLP57077 242 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 YWHAGP61981 247 aaKnown RBP eCLIP26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 TTC31Q49AM3 519 aaPredicted RBP26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 KCNT2Q6UVM3 1135 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 HACE1Q8IYU2 909 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 MZB1Q8WU39 189 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 QKIQ96PU8 341 aaKnown RBP eCLIP26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 FRMD8Q9BZ67 464 aaPredicted RBP26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 CHST12Q9NRB3 414 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 KRT82Q9NSB4 513 aa26.54■■□□□ 1.84
SMARCD3-203ENST00000392811 APRTP07741 180 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 GHRP10912 638 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 KRT4P19013 534 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 SPARCL1Q14515 664 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 SERINC5Q86VE9 423 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 SIX6OS1Q8N1H7 587 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 NT5C3BQ969T7 300 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 ARHGAP39Q9C0H5 1083 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 UPF3AQ9H1J1 476 aaKnown RBP26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 DTLQ9NZJ0 730 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 GCATO75600 419 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 FAM200BP0CF97 657 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 NOS2P35228 1153 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 ARL4AP40617 200 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 C4orf22Q6V702 233 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 CAND1Q86VP6 1230 aaKnown RBP26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 C3orf58Q8NDZ4 430 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 NPY6RQ99463 290 aa26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 TIMM13Q9Y5L4 95 aaPredicted RBP26.53■■□□□ 1.84
SMARCD3-203ENST00000392811 ARL5CA6NH57 179 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 METTL18O95568 372 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 TKTL1P51854 596 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 RABGGTBP53611 331 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 SLC1A5Q15758 541 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 MFSD14CQ5VZR4 134 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 BNIPLQ7Z465 357 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 SPATA21Q7Z572 469 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 SYT15Q9BQS2 421 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 SSU72Q9NP77 194 aaKnown RBP26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 TMPRSS4Q9NRS4 437 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 GRID1Q9ULK0 1009 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 GABRQQ9UN88 632 aa26.52■■□□□ 1.84
SMARCD3-203ENST00000392811 SYNJ2BP-COX16A0A087WUM0 186 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 FAM155AB1AL88 458 aaPredicted RBP26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 H0YHG0 523 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SPAG6O75602 509 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 TOMM70O94826 608 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SCTRP47872 440 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 MGAT3Q09327 533 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 KBTBD12Q3ZCT8 623 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SYPL2Q5VXT5 272 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 CGB2Q6NT52 195 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 AGMOQ6ZNB7 445 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 HFE2Q6ZVN8 426 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 TRPM8Q7Z2W7 1104 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 PSTKQ8IV42 348 aaKnown RBP26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 TMEM86AQ8N2M4 240 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 CFAP36Q96G28 342 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SLC2A13Q96QE2 648 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 AGO3Q9H9G7 860 aaKnown RBP26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 COX16Q9P0S2 106 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 RCOR3Q9P2K3 495 aaPredicted RBP26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 M0QYT0 321 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SUN1O94901 812 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 LHX1P48742 406 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SCNN1GP51170 649 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 DSTYKQ6XUX3 929 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 VPS52Q8N1B4 723 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 SPC25Q9HBM1 224 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 ARHGEF4Q9NR80 690 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 STAP1Q9ULZ2 295 aa26.51■■□□□ 1.83
SMARCD3-203ENST00000392811 MYBPHLA2RUH7 354 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 NRP1O14786 923 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 DGKIO75912 1065 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 MTFR1Q15390 333 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 FBXW10Q5XX13 1052 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 MCUQ8NE86 351 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 OLFM3Q96PB7 478 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 POPDC2Q9HBU9 364 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 ABCF3Q9NUQ8 709 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 GIT1Q9Y2X7 761 aa26.5■■□□□ 1.83
SMARCD3-203ENST00000392811 AP1G2O75843 785 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 HEATR6Q6AI08 1181 aaKnown RBP26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 FAM35AQ86V20 835 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 SLC44A1Q8WWI5 657 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 PCED1BQ96HM7 432 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 SMOQ99835 787 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 PAAF1Q9BRP4 392 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 ULBP1Q9BZM6 244 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 PNPLA8Q9NP80 782 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 CASTOR2A6NHX0 329 aa26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 GBP2P32456 591 aaPredicted RBP26.49■■□□□ 1.83
SMARCD3-203ENST00000392811 SREBF2Q12772 1141 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms