RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 POMCP01189 267 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 LMO2P25791 158 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 DIS3LQ8TF46 1054 aaKnown RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 KBTBD7Q8WVZ9 684 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 NAP1L3Q99457 506 aaPredicted RBP19.71■□□□□ 0.75
CCDC50-202ENST00000392456 DPEP3Q9H4B8 488 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 PCDH10Q9P2E7 1040 aa19.71■□□□□ 0.75
CCDC50-202ENST00000392456 ECHS1P30084 290 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 CLCNKBP51801 687 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 RNASELQ05823 741 aaKnown RBP19.7■□□□□ 0.74
CCDC50-202ENST00000392456 TCEAL1Q15170 157 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 NEPROQ6NW34 567 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 ACOT1Q86TX2 421 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 C3orf58Q8NDZ4 430 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 DPH5Q9H2P9 285 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 RXFP1Q9HBX9 757 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 PCDHGC3Q9UN70 934 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 NBNO60934 754 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 THP07101 528 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 LYNP07948 512 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 MMP8P22894 467 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 HADHBP55084 474 aaKnown RBP19.7■□□□□ 0.74
CCDC50-202ENST00000392456 RPS6KA1Q15418 735 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 WASHC2DQ5SRD0 308 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 TRIM72Q6ZMU5 477 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 PHF13Q86YI8 300 aaPredicted RBP19.7■□□□□ 0.74
CCDC50-202ENST00000392456 FAM13CQ8NE31 585 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 SREK1Q8WXA9 508 aaKnown RBP19.7■□□□□ 0.74
CCDC50-202ENST00000392456 MPP4Q96JB8 637 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 OLFM3Q96PB7 478 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 GIT1Q9Y2X7 761 aa19.7■□□□□ 0.74
CCDC50-202ENST00000392456 CASTOR2A6NHX0 329 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 H0Y3Z8 333 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 KCNK3O14649 394 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 SERPINB3P29508 390 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 PMS2P54278 862 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 INAQ16352 499 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 CCDC142Q17RM4 750 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 FAAH2Q6GMR7 532 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 FITM2Q8N6M3 262 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.69■□□□□ 0.74
CCDC50-202ENST00000392456 UBA3Q8TBC4 463 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 NRDE2Q9H7Z3 1164 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 STOML1Q9UBI4 398 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 INPP5FQ9Y2H2 1132 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 KANSL1LA0AUZ9 987 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 O00370 1275 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 MTA2O94776 668 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 LRPAP1P30533 357 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 TAF6P49848 677 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 EMP3P54852 163 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 KRT71Q3SY84 523 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 CYP4A22Q5TCH4 519 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 LRRC8DQ7L1W4 858 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 OR6B3Q8NGW1 331 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 HES6Q96HZ4 224 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 NT5C1AQ9BXI3 368 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 ADAM7Q9H2U9 754 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 RSAD1Q9HA92 442 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 ETNK1Q9HBU6 452 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 FAM49BQ9NUQ9 324 aa19.69■□□□□ 0.74
CCDC50-202ENST00000392456 XPOTO43592 962 aaKnown RBP19.68■□□□□ 0.74
CCDC50-202ENST00000392456 MICAL2O94851 1124 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 UNC5CO95185 931 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 MARCKSL1P49006 195 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 GALK1P51570 392 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 MAMLD1Q13495 774 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 TCTN1Q2MV58 587 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 PTPN20Q4JDL3 420 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 ZNF598Q86UK7 904 aaKnown RBP19.68■□□□□ 0.74
CCDC50-202ENST00000392456 ECHDC2Q86YB7 292 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 USP38Q8NB14 1042 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 TMEM35BQ8NCS4 154 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 SCG3Q8WXD2 468 aaKnown RBP19.68■□□□□ 0.74
CCDC50-202ENST00000392456 KRT12Q99456 494 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 FAIMQ9NVQ4 179 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 SUN1O94901 812 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 PABPC4LP0CB38 370 aaKnown RBP19.68■□□□□ 0.74
CCDC50-202ENST00000392456 COMTP21964 271 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 MMP13P45452 471 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 PPP1R26Q5T8A7 1209 aaPredicted RBP19.68■□□□□ 0.74
CCDC50-202ENST00000392456 KRT35Q92764 455 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 DDX50Q9BQ39 737 aaKnown RBP19.68■□□□□ 0.74
CCDC50-202ENST00000392456 GDAP2Q9NXN4 497 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 ANAPC7Q9UJX3 599 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 SQORQ9Y6N5 450 aa19.68■□□□□ 0.74
CCDC50-202ENST00000392456 F8W810 466 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 DDX3YO15523 660 aaKnown RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 SERPINB7O75635 380 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 SELPP16109 830 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 CDH5P33151 784 aaPredicted RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 CCT8P50990 548 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 C1QTNF8P60827 252 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 RPL7AP62424 266 aaKnown RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 MTMR3Q13615 1198 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 PAN2Q504Q3 1202 aaKnown RBP19.67■□□□□ 0.74
CCDC50-202ENST00000392456 DCAF12L1Q5VU92 463 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 SYCE1Q8N0S2 351 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 TTC8Q8TAM2 541 aa19.67■□□□□ 0.74
CCDC50-202ENST00000392456 ALG3Q92685 438 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms