RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 ADRA1DP25100 572 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 NTSR1P30989 418 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CIITAP33076 1130 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MCM5P33992 734 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 GALNSP34059 522 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 IDUAP35475 653 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 RFX2P48378 723 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PDLIM4P50479 330 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CLCN5P51795 746 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 GUCY2FP51841 1108 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PGDP52209 483 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ART1P52961 327 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 WDR5P61964 334 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 TXNL4AP83876 142 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 EEF1A2Q05639 463 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CRYZQ08257 329 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CCDC15Q0P6D6 951 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 SLC13A2Q13183 592 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 STK3Q13188 491 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MTMR1Q13613 665 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 DLGAP5Q15398 846 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 SF3B4Q15427 424 aaKnown RBP eCLIP0.69□□□□□ -2.37e-73■■□□□ 12.6
SNORD28-201ENST00000384706 KRTAP24-1Q3LI83 254 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF718Q3SXZ3 478 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ANO6Q4KMQ2 910 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PIK3CD-AS1Q5SR53 167 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 C6orf10Q5SRN2 563 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 LCE1FQ5T754 118 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 HMBOX1Q6NT76 420 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF449Q6P9G9 518 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZDHHC24Q6UX98 284 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF783Q6ZMS7 281 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 Q6ZTK2 550 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 SRGAP1Q7Z6B7 1085 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CTU1Q7Z7A3 348 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 P3H2Q8IVL5 708 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 UEVLDQ8IX04 471 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 SPEM1Q8N4L4 309 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 METTL25Q8N6Q8 603 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PNPLA1Q8N8W4 532 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PRR26Q8N8Z3 221 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 OR6B3Q8NGW1 331 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PLBD2Q8NHP8 589 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CENPIQ92674 756 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 KAT2BQ92831 832 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 INPP5DQ92835 1189 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CELF1Q92879 486 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 WBP2Q969T9 261 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 EME1Q96AY2 570 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MTFMTQ96DP5 389 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MTMR8Q96EF0 704 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PHF21BQ96EK2 531 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PRR11Q96HE9 360 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 KAZALD1Q96I82 304 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CDK5RAP3Q96JB5 506 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PPP1R9BQ96SB3 815 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PIMREGQ9BSJ6 248 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ELOVL1Q9BW60 279 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CINPQ9BW66 212 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 GTPBP4Q9BZE4 634 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ISCUQ9H1K1 167 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZNF556Q9HAH1 456 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MOV10Q9HCE1 1003 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 TCF7L2Q9NQB0 619 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 VPS45Q9NRW7 570 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 THSD1Q9NS62 852 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 SIRT3Q9NTG7 399 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ASNSD1Q9NWL6 643 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PIH1D1Q9NWS0 290 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CAMSAP3Q9P1Y5 1249 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 UTS2RQ9UKP6 389 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 AGO2Q9UKV8 859 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MAGED2Q9UNF1 606 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 MED16Q9Y2X0 877 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PTGDR2Q9Y5Y4 395 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CDY1Q9Y6F8 540 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 TNKSO95271 1327 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SPATA31A1Q5TZJ5 1347 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 LOC102724159A0A0B4J2E5 919 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 KIR2DS5A0A0G2JLQ3 304 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 A0A1B0GUV1 79 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 LOC102723971A0A1B0GUV8 181 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 A0A1W2PPL8 197 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 PLSCR5A0PG75 271 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TLDC2A0PJX2 215 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 DPPA5A6NC42 116 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 OR6C75A6NL08 312 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SMTNL1A8MU46 457 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 A8MVJ9 347 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 BECN2A8MW95 431 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 TTC34A8MYJ7 566 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 INAFM1C9JVW0 142 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 FAM227AF5H4B4 570 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 KIR2DS3K7RE56 304 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 RAB27BO00194 218 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 CD3EAPO15446 510 aaKnown RBP0.68□□□□□ -2.3
SNORD28-201ENST00000384706 CCP110O43303 1012 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SNX2O60749 519 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 PIAS2O75928 621 aa0.68□□□□□ -2.3
SNORD28-201ENST00000384706 SNUPNO95149 360 aaKnown RBP0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms