RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 ST8SIA6P61647 398 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 HDLBPQ00341 1268 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TRIP10Q15642 601 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ACCSLQ4AC99 568 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 HECTD3Q5T447 861 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DDI2Q5TDH0 399 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TRAF7Q6Q0C0 670 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PLEKHM3Q6ZWE6 761 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DEFB132Q7Z7B7 95 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 C11orf74Q86VG3 221 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TSPAN14Q8NG11 270 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 CLHC1Q8NHS4 586 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 NAT14Q8WUY8 206 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ATL1Q8WXF7 558 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 HSPH1Q92598 858 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 THRSPQ92748 146 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 STAMQ92783 540 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ARHGEF26Q96DR7 871 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SYTL2Q9HCH5 934 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FBXL21Q9UKT6 434 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TK2O00142 265 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SEMA3DO95025 777 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TECP42680 631 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 IL1RL1Q01638 556 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 C1DQ13901 141 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PSMD5Q16401 504 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TKFCQ3LXA3 575 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 LIN52Q52LA3 116 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 BAIAP2L2Q6UXY1 529 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 POLNQ7Z5Q5 900 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RASGEF1CQ8N431 466 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 OR6Y1Q8NGX8 325 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SYTL5Q8TDW5 730 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FAM167BQ9BTA0 163 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TRIM31Q9BZY9 425 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TMEM168Q9H0V1 697 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DENND2DQ9H6A0 471 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RAVER2Q9HCJ3 691 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ARHGEF3Q9NR81 526 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DNAAF2Q9NVR5 837 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FAM50BQ9Y247 325 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TTC26A0AVF1 554 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ATP1A1P05023 1023 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PDGFRAP16234 1089 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 EPHX2P34913 555 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DAB2P98082 770 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 NR5A1Q13285 461 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PCBP1Q15365 356 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 CCNG2Q16589 344 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 C2CD6Q53TS8 623 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TTC8Q8TAM2 541 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 GJA10Q969M2 543 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FAM162AQ96A26 154 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MCRS1Q96EZ8 462 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ECSITQ9BQ95 431 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 KBTBD4Q9NVX7 518 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ITGAVP06756 1048 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SPRP35270 261 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PRKAA1Q13131 559 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 RFTN1Q14699 578 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 C15orf59Q2T9L4 293 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 CENPPQ6IPU0 288 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SVOPLQ8N434 492 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MRRFQ96E11 262 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DDX50Q9BQ39 737 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF446Q9NWS9 450 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 NXF1Q9UBU9 619 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 KIAA1257Q9ULG3 409 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MAPK8IP1Q9UQF2 711 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 PNMA6FA0A0J9YX94 578 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FAM170AA1A519 330 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 APOL1O14791 398 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 FARP2O94887 1054 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TGM2P21980 687 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 TARSP26639 723 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ADORA1P30542 326 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF568Q3ZCX4 644 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 STRIP1Q5VSL9 837 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 DDX53Q86TM3 631 aaKnown RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ARHGEF19Q8IW93 802 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 SLC30A8Q8IWU4 369 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 C12orf56Q8IXR9 622 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 IQCKQ8N0W5 287 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 BSNDQ8WZ55 320 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF302Q9NR11 478 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 MAGED1Q9Y5V3 778 aaPredicted RBP5.02□□□□□ -1.61
PTPRD-203ENST00000381196 WNK3Q9BYP7 1800 aa5.02□□□□□ -1.61
PTPRD-203ENST00000381196 COL14A1Q05707 1796 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SERPINE1P05121 402 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 CFL1P23528 166 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 TMBIM6P55061 237 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 POLR2FP61218 127 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ZNF423Q2M1K9 1284 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 RTL3Q8N8U3 475 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 SPATA20Q8TB22 786 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 ROPN1LQ96C74 230 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 DYNLL2Q96FJ2 89 aa5.01□□□□□ -1.61
PTPRD-203ENST00000381196 HEXIM2Q96MH2 286 aaKnown RBP5.01□□□□□ -1.61
PTPRD-203ENST00000381196 RBM15Q96T37 977 aaKnown RBP eCLIP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms