RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 PCDHA2Q9Y5H9 948 aa13.1□□□□□ -0.31
DNMT3A-204ENST00000380756 FOXO6A8MYZ6 492 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 CHADO15335 359 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 AP1G2O75843 785 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 HSPA1AP0DMV8 641 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 HSPA1BP0DMV9 641 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 INSRRP14616 1297 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 RTP1P59025 263 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 TCHHL1Q5QJ38 904 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 AGAP9Q5VTM2 703 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 TAS2R42Q7RTR8 314 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ECHDC2Q86YB7 292 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 LRRC15Q8TF66 581 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 GID8Q9NWU2 228 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NCKIPSDQ9NZQ3 722 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 LACTBL1A8MY62 500 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NKRFO15226 690 aaKnown RBP eCLIP13.09□□□□□ -0.311e-7■■■■□ 23.4
DNMT3A-204ENST00000380756 KRT36O76013 467 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 F9P00740 461 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 CREB1P16220 341 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 HADHAP40939 763 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 PTK2BQ14289 1009 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NPNTQ6UXI9 565 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ADNPQ9H2P0 1102 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 BCAS3Q9H6U6 928 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 FBXO6Q9NRD1 293 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ABCC6O95255 1503 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 A0A096LPK6 155 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NDUFS3O75489 264 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ASS1P00966 412 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 MAP4P27816 1152 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NR2C2P49116 596 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 RBBP7Q16576 425 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 DGKDQ16760 1214 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 CYP4F12Q9HCS2 524 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 UBP1Q9NZI7 540 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 TMEM59LQ9UK28 342 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 RPL26L1Q9UNX3 145 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 PPME1Q9Y570 386 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 SNX13Q9Y5W8 968 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ATP5BP06576 529 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 CTSHP09668 335 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 TSHRP16473 764 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 PSMC3P17980 439 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 PLOD1Q02809 727 aaPredicted RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 CES3Q6UWW8 571 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ZDHHC24Q6UX98 284 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ANGPTL8Q6UXH0 198 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 DDI1Q8WTU0 396 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ZDHHC18Q9NUE0 388 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ETNK2Q9NVF9 386 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 HACD3Q9P035 362 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NOCTQ9UK39 431 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 AAR2Q9Y312 384 aaKnown RBP13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 ZMYM2Q9UBW7 1377 aa13.09□□□□□ -0.31
DNMT3A-204ENST00000380756 NALCNQ8IZF0 1738 aa13.08□□□□□ -0.31
DNMT3A-204ENST00000380756 RNF103O00237 685 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 FBXO47Q5MNV8 452 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 UNC45BQ8IWX7 931 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 CLEC4FQ8N1N0 589 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 C12orf50Q8NA57 414 aaPredicted RBP13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 SIKE1Q9BRV8 207 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 MCM8Q9UJA3 840 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 RASSF9O75901 435 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC6A3Q01959 620 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 FAM13CQ8NE31 585 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 SPOCK2Q92563 424 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 FAR2Q96K12 515 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 NDFIP2Q9NV92 336 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 TCRBV9S1A1TA0A576 114 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 C5orf60A6NFR6 353 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 MLH1P40692 756 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 ZNF143P52747 638 aaPredicted RBP13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 HDAC4P56524 1084 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 CCDC153Q494R4 210 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 PIGWQ7Z7B1 504 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 ANKRD13AQ8IZ07 590 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 CCDC126Q96EE4 140 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 RNF157Q96PX1 679 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 ST6GALNAC4Q9H4F1 302 aa13.08□□□□□ -0.32
DNMT3A-204ENST00000380756 MTA2O94776 668 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 TOMM70O94826 608 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 HMOX2P30519 316 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 GEMP55040 296 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 PRKAA1Q13131 559 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 MMRN1Q13201 1228 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 SLC1A5Q15758 541 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 TTC33Q6PID6 262 aaPredicted RBP13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
DNMT3A-204ENST00000380756 GDPD5Q8WTR4 605 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms