RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 CETPP11597 493 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 PLCG1P19174 1290 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ITIH1P19827 911 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ITGAXP20702 1163 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 ABCB4P21439 1286 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MARSP56192 900 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 GALK2Q01415 458 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 RHAGQ02094 409 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 IL17AQ16552 155 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 KYAT3Q6YP21 454 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 C7orf43Q8WVR3 580 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 CELF1Q92879 486 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 VPS33AQ96AX1 596 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 C18orf8Q96DM3 657 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 CAMKK2Q96RR4 588 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 NMUR2Q9GZQ4 415 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MKRN2Q9H000 416 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 VPS33BQ9H267 617 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 SYTL2Q9HCH5 934 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 RIC8BQ9NVN3 520 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MRPL39Q9NYK5 338 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 SEPT3Q9UH03 358 aa9.67□□□□□ -0.86
PTPRA-204ENST00000380393 CPSF3Q9UKF6 684 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 MTO1Q9Y2Z2 717 aaKnown RBP9.67□□□□□ -0.86
PTPRA-204ENST00000380393 C4BP0C0L5 1744 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 COL5A3P25940 1745 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 C2orf71A6NGG8 1288 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 GAS7O60861 476 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 USP12O75317 370 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 KATNA1O75449 491 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 RHOBTB3O94955 611 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 OR5F1O95221 314 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 VEGFAP15692 232 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 PSMC3P17980 439 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 NAMPTP43490 491 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 PRAMEP78395 509 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 CTBSQ01459 385 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 TRAF2Q12933 501 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 SNTA1Q13424 505 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 AARS2Q5JTZ9 985 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 DYMQ7RTS9 669 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 GRIN3AQ8TCU5 1115 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 P2RX5Q93086 422 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 DCPSQ96C86 337 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 WRNIP1Q96S55 665 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 IFT22Q9H7X7 185 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 ATP13A2Q9NQ11 1180 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 KLQ9UEF7 1012 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 UGT2A1Q9Y4X1 527 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 ACTL7BQ9Y614 415 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 LRRC72A6NJI9 287 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 ZBTB48P10074 688 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 CD9P21926 228 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 POLR2BP30876 1174 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 RACK1P63244 317 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 MRPS15P82914 257 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 NFE2L1Q14494 772 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 CAVIN4Q5BKX8 364 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 RARS2Q5T160 578 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 SDE2Q6IQ49 451 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 C4orf33Q8N1A6 199 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 BEND7Q8N7W2 519 aaPredicted RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 SLAIN1Q8ND83 568 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 RPF2Q9H7B2 306 aaKnown RBP9.66□□□□□ -0.86
PTPRA-204ENST00000380393 MAGEE1Q9HCI5 957 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 KCTD5Q9NXV2 234 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 LRP2BPQ9P2M1 347 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 GABBR1Q9UBS5 961 aa9.66□□□□□ -0.86
PTPRA-204ENST00000380393 A0A1W2PQ72 361 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 PODXLO00592 558 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 MAN1A2O60476 641 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 RNGTTO60942 597 aaKnown RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 MFN2O95140 757 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ATP2C1P98194 919 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 NR1H3Q13133 447 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TRPC3Q13507 836 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 CCNIQ14094 377 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 PON2Q15165 354 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 HABP4Q5JVS0 413 aaKnown RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ANKRD26P1Q6NSI1 321 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 BNC2Q6ZN30 1099 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ADAMTSL2Q86TH1 951 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 LCORLQ8N3X6 602 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TPCN2Q8NHX9 752 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 JADE3Q92613 823 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 GPKOWQ92917 476 aaPredicted RBP eCLIP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 OXNAD1Q96HP4 312 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 CEP170P1Q96L14 293 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 GGA3Q9NZ52 723 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 TRAF6Q9Y4K3 522 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 MEI4A8MW99 385 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ADAMTS3O15072 1205 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 FGFR1P11362 822 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 SERPINB1P30740 379 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 RPA3P35244 121 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 HPCAL1P37235 193 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 CDH15P55291 814 aa9.65□□□□□ -0.86
PTPRA-204ENST00000380393 ZNF211Q13398 564 aaPredicted RBP9.65□□□□□ -0.86
PTPRA-204ENST00000380393 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms