RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 PTPN1P18031 435 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 NSL1Q96IY1 281 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 FICDQ9BVA6 458 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 GPR63Q9BZJ6 419 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CDY2AQ9Y6F7 541 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 ROBO1Q9Y6N7 1651 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 DDX3YO15523 660 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 GLRA3O75311 464 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 SUPT7LO94864 414 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 MT-CO1P00395 513 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 LTFP02788 710 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 SLC2A3P11169 496 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 LBRQ14739 615 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 RBBP7Q16576 425 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 ZRANB3Q5FWF4 1079 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 EIF1ADQ8N9N8 165 aaKnown RBP13.6□□□□□ -0.23
NPHP4-203ENST00000378169 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
NPHP4-203ENST00000378169 PHLPP1O60346 1717 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 TSPAN3O60637 253 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 ZNF189O75820 626 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 NFKBIAP25963 317 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 CCR1P32246 355 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SKOR1P84550 965 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SATB1Q01826 763 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 FAM171A1Q5VUB5 890 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 TSPAN17Q96FV3 270 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 TKTL2Q9H0I9 626 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 NEUROG2Q9H2A3 272 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 ST6GALNAC4Q9H4F1 302 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 DNAJC16Q9Y2G8 782 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 TMEM191CA6NGB0 347 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 RASSF10A6NK89 507 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 DHX15O43143 795 aaKnown RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 CYBBP04839 570 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 CKMP06732 381 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 ZCCHC23Q6ZST2 131 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 MREGQ8N565 214 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 NOD2Q9HC29 1040 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SMPD4Q9NXE4 827 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 AURKCQ9UQB9 309 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 AAR2Q9Y312 384 aaKnown RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SNCAIPQ9Y6H5 919 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SCN11AQ9UI33 1791 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 hCG_1818297A0A087WSY0 165 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 BTBD19C9JJ37 291 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 ANP32DO95626 131 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 KCNA4P22459 653 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 DRG2P55039 364 aaKnown RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 GEMP55040 296 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SNX17Q15036 470 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 ZDHHC17Q8IUH5 632 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 TTC30BQ8N4P2 665 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 C1orf127Q8N9H9 656 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 LENG1Q96BZ8 264 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 CCDC138Q96M89 665 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 IL1RL2Q9HB29 575 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 C2CD2Q9Y426 696 aa13.59□□□□□ -0.23
NPHP4-203ENST00000378169 MAFBQ9Y5Q3 323 aaPredicted RBP13.59□□□□□ -0.23
NPHP4-203ENST00000378169 STX7O15400 261 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ALDH2P05091 517 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 FECHP22830 423 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 PTPN7P35236 360 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 MGAT5Q09328 741 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 CAPRIN1Q14444 709 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ACAP1Q15027 740 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 LRRC38Q5VT99 294 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 CCNJLQ8IV13 435 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 TRIML2Q8N7C3 387 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SMARCD1Q96GM5 515 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 RNF157Q96PX1 679 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SRPK1Q96SB4 655 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 POPDC2Q9HBU9 364 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 EML4Q9HC35 981 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 DMAP1Q9NPF5 467 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ZNF536O15090 1300 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ADGRA2Q96PE1 1338 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 H0Y626 953 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 PQBP1O60828 265 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 TNFRSF8P28908 595 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 AKT1P31749 480 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ARL2P36404 184 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SERPINB4P48594 390 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SLC11A2P49281 568 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 TUBP50607 506 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 CDH18Q13634 790 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ITGA9Q13797 1035 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 FAM83EQ2M2I3 478 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SZRD1Q7Z422 152 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 PTAR1Q7Z6K3 402 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 B3GALNT2Q8NCR0 500 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SYT17Q9BSW7 474 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 ILKAPQ9H0C8 392 aaPredicted RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 APOBEC3GQ9HC16 384 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 RUVBL2Q9Y230 463 aaKnown RBP13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SUPT3HB4E1H0 165 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 F5H5T6 163 aa13.58□□□□□ -0.24
NPHP4-203ENST00000378169 SCAMP3O14828 347 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms