RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 CAMTA1Q9Y6Y1 1673 aa9.03□□□□□ -0.96
PCDH9-202ENST00000377865 A0A087WXM4 84 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 E2F8A0AVK6 867 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 NCAM2O15394 837 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 HBP1O60381 514 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 LYPLA2O95372 231 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 GH1P01241 217 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 COX4I1P13073 169 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 RPL26P61254 145 aaKnown RBP9.02□□□□□ -0.96
PCDH9-202ENST00000377865 RINLQ6ZS11 566 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 ERO1BQ86YB8 467 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 TMCO5AQ8N6Q1 288 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 COLGALT1Q8NBJ5 622 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 NKX2-3Q8TAU0 364 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 FAM193BQ96PV7 902 aaPredicted RBP9.02□□□□□ -0.96
PCDH9-202ENST00000377865 MMP19Q99542 508 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 DHX33Q9H6R0 707 aaKnown RBP9.02□□□□□ -0.96
PCDH9-202ENST00000377865 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 CATSPERBQ9H7T0 1116 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 DPP3Q9NY33 737 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 NCKIPSDQ9NZQ3 722 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 DNAJB4Q9UDY4 337 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 TSC22D4Q9Y3Q8 395 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 MYH7P12883 1935 aa9.02□□□□□ -0.96
PCDH9-202ENST00000377865 TYW5A2RUC4 315 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 PMM2O15305 246 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 DAB1O75553 588 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 ASMTLO95671 621 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 DNAJB2P25686 324 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 TRPC1P48995 793 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 KRR1Q13601 381 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 TCEAL1Q15170 157 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 DPP9Q86TI2 863 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 MYLK4Q86YV6 388 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 WNK4Q96J92 1243 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 MRIQ9BWK5 157 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 SCN3BQ9NY72 215 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 ASTN2O75129 1339 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 A0A1W2PPM1 405 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 WDR27A2RRH5 827 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 ARHGEF9O43307 516 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 RBP1P09455 135 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 PRDX6P30041 224 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 TSPY1Q01534 308 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 BST1Q10588 318 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 MPP3Q13368 585 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 HABP4Q5JVS0 413 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 ACER1Q8TDN7 264 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 DENND2DQ9H6A0 471 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 A0A0B4J269 797 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 F8VP50 259 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 MICAL2O94851 1124 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 SERPINB1P30740 379 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 NPY2RP49146 381 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 RTP1P59025 263 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 TAS2R40P59535 323 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 FAM182BQ5T319 152 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF280CQ8ND82 737 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 TMEM161BQ8NDZ6 487 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 OR6P1Q8NGX9 317 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 C10orf82Q8WW14 230 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 DGCR14Q96DF8 476 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 PDCD2LQ9BRP1 358 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 AP5M1Q9H0R1 490 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 DNAJC28Q9NX36 388 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 M0R3G1 203 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 SMIM5Q71RC9 77 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 HOMEZQ8IX15 550 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 SLC44A1Q8WWI5 657 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 VPS50Q96JG6 964 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 PRPF18Q99633 342 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 RBBP8Q99708 897 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 RTKNQ9BST9 563 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 ST6GALNAC4Q9H4F1 302 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 IARS2Q9NSE4 1012 aaKnown RBP9.02□□□□□ -0.97
PCDH9-202ENST00000377865 USP20Q9Y2K6 914 aa9.02□□□□□ -0.97
PCDH9-202ENST00000377865 C10orf71Q711Q0 1435 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF142P52746 1687 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF839A8K0R7 811 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 KPNA4O00629 521 aaPredicted RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 TRUB2O95900 331 aaKnown RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 CYP2C9P11712 490 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 MIPP30301 263 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DEFA1P59665 94 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DEFA3P59666 94 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 EVX2Q03828 476 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 DCAF12L1Q5VU92 463 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 PLEKHA7Q6IQ23 1121 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 ALYREFQ86V81 257 aaKnown RBP9.01□□□□□ -0.97
PCDH9-202ENST00000377865 RDH11Q8TC12 318 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 SEC14L1Q92503 715 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 ZNF333Q96JL9 665 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 KREMEN1Q96MU8 473 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 GCNAQ96QF7 691 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 FAM8A1Q9UBU6 413 aa9.01□□□□□ -0.97
PCDH9-202ENST00000377865 MORF4L1Q9UBU8 362 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms