RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 NRG2O14511 850 aaPredicted RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 CCP110O43303 1012 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 ZSCAN12O43309 604 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 RNF8O76064 485 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 MTA2O94776 668 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 TBX18O95935 607 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 SLC2A3P11169 496 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 LAMP2P13473 410 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 RDXP35241 583 aaKnown RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 NAP1L1P55209 391 aaKnown RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 TFF2Q03403 129 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 MTA1Q13330 715 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 PIGHQ14442 188 aaPredicted RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 ACAP1Q15027 740 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 TRIP4Q15650 581 aaPredicted RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 MTSS1LQ765P7 747 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 STRADAQ7RTN6 431 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 TAC4Q86UU9 113 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 ARID3BQ8IVW6 561 aaPredicted RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 CELF5Q8N6W0 485 aaKnown RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 NT5C3BQ969T7 300 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 PLD4Q96BZ4 506 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 PGAP3Q96FM1 320 aaPredicted RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 CFAP57Q96MR6 1250 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 MYADMQ96S97 322 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 CYP2S1Q96SQ9 504 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 NPY6RQ99463 290 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 RNF38Q9H0F5 515 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 TDP1Q9NUW8 608 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 DDIT4Q9NX09 232 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 OBP2AQ9NY56 170 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 EPS15L1Q9UBC2 864 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 SFMBT1Q9UHJ3 866 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 LSM7Q9UK45 103 aaKnown RBP13.73□□□□□ -0.21
TIMP1-202ENST00000377017 TLR6Q9Y2C9 796 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 CPQQ9Y646 472 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 DOCK8Q8NF50 2099 aa13.73□□□□□ -0.21
TIMP1-202ENST00000377017 MDM4O15151 490 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 IRAK2O43187 625 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 IGLV3-25P01717 112 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 APOEP02649 317 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 TCF3P15923 654 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ARHGAP25P42331 645 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 HADHBP55084 474 aaKnown RBP13.72□□□□□ -0.21
TIMP1-202ENST00000377017 TBX4P57082 545 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ATP11AP98196 1134 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 DEUP1Q05D60 604 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 NME3Q13232 169 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 CDO1Q16878 200 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 CCDC14Q49A88 953 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ARHGAP29Q52LW3 1261 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 NUGGCQ68CJ6 796 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 UNC45BQ8IWX7 931 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ADAM32Q8TC27 787 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ATXN2LQ8WWM7 1075 aaKnown RBP13.72□□□□□ -0.21
TIMP1-202ENST00000377017 RNF34Q969K3 372 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ZSWIM3Q96MP5 696 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ASB16Q96NS5 453 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 SLC22A12Q96S37 553 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 TBCBQ99426 244 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 KLF16Q9BXK1 252 aaPredicted RBP13.72□□□□□ -0.21
TIMP1-202ENST00000377017 TRPV4Q9HBA0 871 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 ZFP14Q9HCL3 533 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 OSGEPQ9NPF4 335 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 PRDM6Q9NQX0 595 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 SMPD4Q9NXE4 827 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 SLC12A6Q9UHW9 1150 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 PPP2R2CQ9Y2T4 447 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 SH3BP1Q9Y3L3 701 aa13.72□□□□□ -0.21
TIMP1-202ENST00000377017 SYNJ2BP-COX16A0A087WUM0 186 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 LEFTY2O00292 366 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 MSI1O43347 362 aaKnown RBP13.71□□□□□ -0.21
TIMP1-202ENST00000377017 CCR1P32246 355 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 HARS2P49590 506 aaKnown RBP13.71□□□□□ -0.21
TIMP1-202ENST00000377017 RING1Q06587 406 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 HS1BP3Q53T59 392 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 FAM78AQ5JUQ0 283 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 TRNP1Q6NT89 227 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 KIAA1958Q8N8K9 716 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 NIPA2Q8N8Q9 360 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 SH3RF2Q8TEC5 729 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 FAM172AQ8WUF8 416 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 USP13Q92995 863 aaPredicted RBP13.71□□□□□ -0.21
TIMP1-202ENST00000377017 RPGRIP1Q96KN7 1286 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 DCLK3Q9C098 648 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.71□□□□□ -0.21
TIMP1-202ENST00000377017 COX16Q9P0S2 106 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 PRKAG3Q9UGI9 489 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 ZNF510Q9Y2H8 683 aa13.71□□□□□ -0.21
TIMP1-202ENST00000377017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.71□□□□□ -0.21
TIMP1-202ENST00000377017 REV3LO60673 3130 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 RCCD1A6NED2 376 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 GOLGA6L9A6NEM1 432 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 ENDOD1O94919 500 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 PRAMEF12O95522 483 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 HMBSP08397 361 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 IRF1P10914 325 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 IL9P15248 144 aa13.7□□□□□ -0.22
TIMP1-202ENST00000377017 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms