RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 CALCAP01258 141 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 UCHL3P15374 230 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 SLC6A11P48066 632 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 RPL34P49207 117 aaKnown RBP23.09■■□□□ 1.29
SRM-201ENST00000376957 SEC13P55735 322 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 APBA1Q02410 837 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 DRAP1Q14919 205 aaPredicted RBP23.09■■□□□ 1.29
SRM-201ENST00000376957 GAB4Q2WGN9 574 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 C2orf27AQ580R0 203 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 GRAMD4Q6IC98 578 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 BHLHA9Q7RTU4 235 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 TMEM110Q86TL2 294 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 FAM71AQ8IYT1 594 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 HINFPQ9BQA5 517 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 SLC4A5Q9BY07 1137 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 STK33Q9BYT3 514 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 SYNCQ9H7C4 482 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 DNAJC17Q9NVM6 304 aaKnown RBP23.09■■□□□ 1.29
SRM-201ENST00000376957 TMEM63CQ9P1W3 806 aa23.09■■□□□ 1.29
SRM-201ENST00000376957 CCDC163A0A0D9SF12 145 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 K7EQS6 105 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 CACNG3O60359 315 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 LATS1O95835 1130 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 KDSRQ06136 332 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 KCNMA1Q12791 1236 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 TRIP4Q15650 581 aaPredicted RBP23.08■■□□□ 1.29
SRM-201ENST00000376957 NUGGCQ68CJ6 796 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 NAIF1Q69YI7 327 aaPredicted RBP23.08■■□□□ 1.29
SRM-201ENST00000376957 MSANTD2Q6P1R3 559 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 BEND5Q7L4P6 421 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 IPO4Q8TEX9 1081 aaKnown RBP23.08■■□□□ 1.29
SRM-201ENST00000376957 WBP2Q969T9 261 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 SERPINB11Q96P15 392 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 SFMBT1Q9UHJ3 866 aa23.08■■□□□ 1.29
SRM-201ENST00000376957 AGO1Q9UL18 857 aaKnown RBP23.08■■□□□ 1.29
SRM-201ENST00000376957 K7ESF4 209 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 LILRB5O75023 590 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 SLC11A2P49281 568 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 DGKGP49619 791 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 PDCLQ13371 301 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 DMC1Q14565 340 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 HEATR6Q6AI08 1181 aaKnown RBP23.07■■□□□ 1.28
SRM-201ENST00000376957 ASCL5Q7RTU5 278 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 ETFBKMTQ8IXQ9 262 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 CPXM2Q8N436 756 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 MSANTD4Q8NCY6 345 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 USP33Q8TEY7 942 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 PPP1R13BQ96KQ4 1090 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 DDX50Q9BQ39 737 aaKnown RBP23.07■■□□□ 1.28
SRM-201ENST00000376957 POPDC2Q9HBU9 364 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 LIMA1Q9UHB6 759 aaKnown RBP23.07■■□□□ 1.28
SRM-201ENST00000376957 FHOD1Q9Y613 1164 aa23.07■■□□□ 1.28
SRM-201ENST00000376957 FANCMQ8IYD8 2048 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 E5RJQ4 531 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 ZBTB24O43167 697 aaPredicted RBP23.06■■□□□ 1.28
SRM-201ENST00000376957 ALDH1A2O94788 518 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 APBB3O95704 486 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 KLKB1P03952 638 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 TDGF1P13385 188 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 FNTBP49356 437 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 COPB1P53618 953 aaKnown RBP23.06■■□□□ 1.28
SRM-201ENST00000376957 YWHAZP63104 245 aaKnown RBP23.06■■□□□ 1.28
SRM-201ENST00000376957 ANO6Q4KMQ2 910 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 EFHC1Q5JVL4 640 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 EOGTQ5NDL2 527 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 C10orf76Q5T2E6 689 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 SDE2Q6IQ49 451 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 SLC47A2Q86VL8 602 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 C12orf40Q86WS4 652 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 TERB1Q8NA31 727 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 TMEM35BQ8NCS4 154 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 CLEC4CQ8WTT0 213 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 DDI1Q8WTU0 396 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 SPAG5Q96R06 1193 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 BPIFA3Q9BQP9 254 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 ACP6Q9NPH0 428 aa23.06■■□□□ 1.28
SRM-201ENST00000376957 MYOFQ9NZM1 2061 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 GLI1P08151 1106 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 CLCN1P35523 988 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 DGKEP52429 567 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 TBX4P57082 545 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 UBXN1Q04323 297 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 RING1Q06587 406 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 NNTQ13423 1086 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 KLHL40Q2TBA0 621 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 MPPE1Q53F39 396 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 ADGRF1Q5T601 910 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 TOGARAM2Q6ZUX3 1019 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 WDR5BQ86VZ2 330 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 AOPEPQ8N6M6 819 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 TSTD1Q8NFU3 115 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 NEK11Q8NG66 645 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 RUBCNQ92622 972 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 IRX2Q9BZI1 471 aaPredicted RBP23.05■■□□□ 1.28
SRM-201ENST00000376957 EPC1Q9H2F5 836 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 POLMQ9NP87 494 aaPredicted RBP23.05■■□□□ 1.28
SRM-201ENST00000376957 NCDNQ9UBB6 729 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 MMP17Q9ULZ9 603 aa23.05■■□□□ 1.28
SRM-201ENST00000376957 TYW5A2RUC4 315 aaKnown RBP23.04■■□□□ 1.28
SRM-201ENST00000376957 LRRC10BA6NIK2 292 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms