RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 BRD9Q9H8M2 597 aa20.77■□□□□ 0.92
DDR1-228ENST00000376575 HPS4Q9NQG7 708 aa20.77■□□□□ 0.92
DDR1-228ENST00000376575 TICRRQ7Z2Z1 1910 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 FAM170AA1A519 330 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 GRAP2O75791 330 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 FTLP02792 175 aaPredicted RBP20.76■□□□□ 0.91
DDR1-228ENST00000376575 FECHP22830 423 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 KPNA1P52294 538 aaPredicted RBP20.76■□□□□ 0.91
DDR1-228ENST00000376575 RING1Q06587 406 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 SIGLEC14Q08ET2 396 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 DCAF6Q58WW2 860 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 PPP1R15BQ5SWA1 713 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 IER5LQ5T953 404 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 FAM102AQ5T9C2 384 aaPredicted RBP20.76■□□□□ 0.91
DDR1-228ENST00000376575 TRNP1Q6NT89 227 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.76■□□□□ 0.91
DDR1-228ENST00000376575 VPS36Q86VN1 386 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 ADGRG2Q8IZP9 1017 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 PLD4Q96BZ4 506 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 OTUB2Q96DC9 234 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 CHP1Q99653 195 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 DDX23Q9BUQ8 820 aaKnown RBP20.76■□□□□ 0.91
DDR1-228ENST00000376575 ADAM33Q9BZ11 813 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 DUS2Q9NX74 493 aaKnown RBP20.76■□□□□ 0.91
DDR1-228ENST00000376575 RRN3Q9NYV6 651 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 TBC1D14Q9P2M4 693 aa20.76■□□□□ 0.91
DDR1-228ENST00000376575 SLC12A8A0AV02 714 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 OTOL1A6NHN0 477 aaPredicted RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 SHISA7A6NL88 538 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 SLC9A3R1O14745 358 aaPredicted RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 CAPN9O14815 690 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 TRUB2O95900 331 aaKnown RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 FLT3P36888 993 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 EIF4A3P38919 411 aaKnown RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 PITX1P78337 314 aaPredicted RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 TSR1Q2NL82 804 aaKnown RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 OTUD1Q5VV17 481 aaPredicted RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 TRIM68Q6AZZ1 485 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 CC2D1AQ6P1N0 951 aaPredicted RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 TAC4Q86UU9 113 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 PGAP3Q96FM1 320 aaPredicted RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 SERPINB11Q96P15 392 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 NPY6RQ99463 290 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 ZNHIT6Q9NWK9 470 aaKnown RBP20.75■□□□□ 0.91
DDR1-228ENST00000376575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDR1-228ENST00000376575 IMPACTQ9P2X3 320 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 STOML2Q9UJZ1 356 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 TLR6Q9Y2C9 796 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 SH3BP1Q9Y3L3 701 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 WNT6Q9Y6F9 365 aa20.75■□□□□ 0.91
DDR1-228ENST00000376575 SIGLEC16A6NMB1 481 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 GOLGA8SH3BPF8 625 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 IRAK2O43187 625 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 MSI1O43347 362 aaKnown RBP20.74■□□□□ 0.91
DDR1-228ENST00000376575 RRM1P23921 792 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 TNK2Q07912 1038 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 SLC18A3Q16572 532 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 PLEKHA7Q6IQ23 1121 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 TRIM67Q6ZTA4 783 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 BBS7Q8IWZ6 715 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 FAM217AQ8IXS0 508 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 AZIN2Q96A70 460 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 FCRL2Q96LA5 508 aaPredicted RBP20.74■□□□□ 0.91
DDR1-228ENST00000376575 PANX2Q96RD6 677 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 DCLK3Q9C098 648 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 GTSE1Q9NYZ3 720 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 CALCOCO1Q9P1Z2 691 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 ZNF510Q9Y2H8 683 aa20.74■□□□□ 0.91
DDR1-228ENST00000376575 COL4A3Q01955 1670 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 MYOFQ9NZM1 2061 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 KRBA1A5PL33 1030 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 C2CD4BA6NLJ0 364 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 TMCO5BA8MYB1 307 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 LATS1O95835 1130 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 IRF1P10914 325 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 GLULP15104 373 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 ARSAP15289 507 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 RUNX3Q13761 415 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 SLC25A52Q3SY17 297 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 SLC44A4Q53GD3 710 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 ALKBH5Q6P6C2 394 aaKnown RBP20.73■□□□□ 0.91
DDR1-228ENST00000376575 DNAAF5Q86Y56 855 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 ADAM32Q8TC27 787 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 ATP2A3Q93084 1043 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 CHFRQ96EP1 664 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.73■□□□□ 0.91
DDR1-228ENST00000376575 EBF3Q9H4W6 596 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 EPHX3Q9H6B9 360 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 ECT2Q9H8V3 914 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 NHEJ1Q9H9Q4 299 aaPredicted RBP20.73■□□□□ 0.91
DDR1-228ENST00000376575 GRPEL1Q9HAV7 217 aa20.73■□□□□ 0.91
DDR1-228ENST00000376575 METTL5Q9NRN9 209 aaKnown RBP20.73■□□□□ 0.91
DDR1-228ENST00000376575 LSM7Q9UK45 103 aaKnown RBP20.73■□□□□ 0.91
DDR1-228ENST00000376575 AGO1Q9UL18 857 aaKnown RBP20.73■□□□□ 0.91
DDR1-228ENST00000376575 GFRA2O00451 464 aa20.72■□□□□ 0.91
DDR1-228ENST00000376575 ENDOD1O94919 500 aa20.72■□□□□ 0.91
DDR1-228ENST00000376575 MYBL1P10243 752 aa20.72■□□□□ 0.91
DDR1-228ENST00000376575 KRT3P12035 628 aa20.72■□□□□ 0.91
DDR1-228ENST00000376575 CORO1AP31146 461 aaKnown RBP20.72■□□□□ 0.91
DDR1-228ENST00000376575 IFNAR2P48551 515 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms