RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 MORF4L2Q15014 288 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 EFHC2Q5JST6 749 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 VARS2Q5ST30 1063 aaKnown RBP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 RNASEH2BQ5TBB1 312 aaKnown RBP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 HOOK3Q86VS8 718 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 CEP57Q86XR8 500 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 SCN4BQ8IWT1 228 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 DCP1BQ8IZD4 617 aaKnown RBP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 B3GALT6Q96L58 329 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 DDIT4Q9NX09 232 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 BCCIPQ9P287 314 aaKnown RBP eCLIP17.54■□□□□ 0.4
PTPN20-203ENST00000374342 SHOC2Q9UQ13 582 aa17.54■□□□□ 0.4
PTPN20-203ENST00000374342 TBKBP1A7MCY6 615 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 SYN3O14994 580 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 OAZ2O95190 189 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 SLC11A1P49279 550 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 CTCFP49711 727 aaPredicted RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 MNX1P50219 401 aaPredicted RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 SLC5A3P53794 718 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 NRLP54845 237 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 FAM171A1Q5VUB5 890 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 SCAMP5Q8TAC9 235 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 PRCCQ92733 491 aaPredicted RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 MRPL9Q9BYD2 267 aaKnown RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 MARCH5Q9NX47 278 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 USP3Q9Y6I4 520 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 SMIM23A6NLE4 172 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 H3BRJ5 948 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 ZFXP17010 805 aaPredicted RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 AMPD1P23109 780 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 PBX3P40426 434 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 LMAN1P49257 510 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 GBE1Q04446 702 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 SKIDA1Q1XH10 827 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 CTXN3Q4LDR2 81 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 NCBP2-AS2Q69YL0 99 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 PM20D1Q6GTS8 502 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 PSTKQ8IV42 348 aaKnown RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 DIS3LQ8TF46 1054 aaKnown RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 RNF139Q8WU17 664 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 RBM15Q96T37 977 aaKnown RBP eCLIP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 FOXP3Q9BZS1 431 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 WDR6Q9NNW5 1121 aaKnown RBP17.53■□□□□ 0.4
PTPN20-203ENST00000374342 NINJ2Q9NZG7 142 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 MFHAS1Q9Y4C4 1052 aa17.53■□□□□ 0.4
PTPN20-203ENST00000374342 KCNN4O15554 427 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 CREB3O43889 395 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 CXCL10P02778 98 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 BSPRYQ5W0U4 402 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 ZNF280DQ6N043 979 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 CEP128Q6ZU80 1094 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 CDKL3Q8IVW4 592 aaPredicted RBP17.52■□□□□ 0.4
PTPN20-203ENST00000374342 PPIL6Q8IXY8 311 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 SCML4Q8N228 414 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 CCDC33Q8N5R6 958 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 LRRN4Q8WUT4 740 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 COLEC11Q9BWP8 271 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 GPR62Q9BZJ7 368 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 SAYSD1Q9NPB0 183 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 ARHGEF4Q9NR80 690 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 ETNK2Q9NVF9 386 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 RRN3Q9NYV6 651 aa17.52■□□□□ 0.4
PTPN20-203ENST00000374342 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.52■□□□□ 0.4
PTPN20-203ENST00000374342 RCOR3Q9P2K3 495 aaPredicted RBP17.52■□□□□ 0.4
PTPN20-203ENST00000374342 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
PTPN20-203ENST00000374342 SF3B1O75533 1304 aaKnown RBP eCLIP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 GOLGA8MH3BSY2 632 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 BASP1P80723 227 aaKnown RBP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 KYNUQ16719 465 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 AGBL2Q5U5Z8 902 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 ANKRD22Q5VYY1 191 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 TAC4Q86UU9 113 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 STKLD1Q8NE28 680 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 CPT1BQ92523 772 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 C9orf72Q96LT7 481 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 PGLYRP2Q96PD5 576 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 ATP11BQ9Y2G3 1177 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 CFAP69A5D8W1 941 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 NT5C1B-RDH14C9J2C7 533 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 EEF2KO00418 725 aaKnown RBP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 TTC4O95801 387 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 NR1D1P20393 614 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 RBL1P28749 1068 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 STIP1P31948 543 aaKnown RBP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 NFE2Q16621 373 aaPredicted RBP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 FAM182AQ5T1J6 154 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 FUT10Q6P4F1 479 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 CRIPAKQ8N1N5 446 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 LRRC43Q8N309 656 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 EPS8L3Q8TE67 593 aaKnown RBP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 NTAN1Q96AB6 310 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 PGAP3Q96FM1 320 aaPredicted RBP17.51■□□□□ 0.39
PTPN20-203ENST00000374342 TRIM62Q9BVG3 475 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 CRISPLD2Q9H0B8 497 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 ANLNQ9NQW6 1124 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 LTBP2Q14767 1821 aa17.51■□□□□ 0.39
PTPN20-203ENST00000374342 TLDC2A0PJX2 215 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 MFSD11O43934 449 aa17.5■□□□□ 0.39
PTPN20-203ENST00000374342 UPP2O95045 317 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms