RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ZMPSTE24O75844 475 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 POLBP06746 335 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 GHRP10912 638 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ENO3P13929 434 aaPredicted RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ASPAP45381 313 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 EFHC1Q5JVL4 640 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SPDYCQ5MJ68 293 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 N4BP2L1Q5TBK1 243 aaPredicted RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PIGZQ86VD9 579 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TBC1D10AQ9BXI6 508 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 UGT1A7Q9HAW7 530 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 UGT1A10Q9HAW8 530 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 UGT1A8Q9HAW9 530 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 DDX43Q9NXZ2 648 aaKnown RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ITGA11Q9UKX5 1188 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CD4P01730 458 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 KCNA3P22001 575 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PSMB4P28070 264 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PDK2Q15119 407 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 RNASEH2BQ5TBB1 312 aaKnown RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TTC39CQ8N584 583 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TTC8Q8TAM2 541 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CCDC97Q96F63 343 aaPredicted RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ZNF317Q96PQ6 595 aaPredicted RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TBCBQ99426 244 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 EPAS1Q99814 870 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 MAGEB5Q9BZ81 275 aa18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ABI2Q9NYB9 513 aaPredicted RBP18.26■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 GRIA1P42261 906 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 BST2Q10589 180 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 POU6F1Q14863 301 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PDK1Q15118 436 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SLC27A1Q6PCB7 646 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 LAYNQ6UX15 382 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 MIB1Q86YT6 1006 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 UNC5BQ8IZJ1 945 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ARAP2Q8WZ64 1704 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SYT11Q9BT88 431 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 WDCPQ9H6R7 721 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CYP4F12Q9HCS2 524 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 IARS2Q9NSE4 1012 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 RBPJLQ9UBG7 517 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CXCL11O14625 94 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ZNF157P51786 506 aaPredicted RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 MFSD5Q6N075 450 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 C12orf50Q8NA57 414 aaPredicted RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 HTR3CQ8WXA8 447 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SDCBP2Q9H190 292 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SARS2Q9NP81 518 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TMPRSS4Q9NRS4 437 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 DRG1Q9Y295 367 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CNTNAP2Q9UHC6 1331 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 GRIN3BO60391 1043 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SV2CQ496J9 727 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 STRA8Q7Z7C7 330 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ALYREFQ86V81 257 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 VCX3BQ9H321 246 aa18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ZNF395Q9H8N7 513 aaPredicted RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 MTO1Q9Y2Z2 717 aaKnown RBP18.25■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SDR42E2A6NKP2 422 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 LYPLA1O75608 230 aaPredicted RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 LUC7L3O95232 432 aaKnown RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 LMO2P25791 158 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PDCD2Q16342 344 aaPredicted RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 LRRC38Q5VT99 294 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CTU1Q7Z7A3 348 aaKnown RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CCDC68Q9H2F9 335 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PDZD7Q9H5P4 517 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ADA2Q9NZK5 511 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 GRID1Q9ULK0 1009 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SSX2IPQ9Y2D8 614 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 DCAF8L1A6NGE4 600 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CILPO75339 1184 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ATICP31939 592 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 MBTD1Q05BQ5 628 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ACVR2BQ13705 512 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SIX1Q15475 284 aaPredicted RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 NBPF20Q3BBV1 942 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TNS4Q8IZW8 715 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ULBP1Q9BZM6 244 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 NRDE2Q9H7Z3 1164 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 DNAJC8O75937 253 aaPredicted RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SERPINB5P36952 375 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 YWHAZP63104 245 aaKnown RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 OCRLQ01968 901 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 BST1Q10588 318 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 MTHFD1LQ6UB35 978 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 OR52K1Q8NGK4 314 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TMA16Q96EY4 203 aaKnown RBP18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 ACSS3Q9H6R3 686 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PCDH18Q9HCL0 1135 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 SCOCQ9UIL1 159 aa18.24■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PMLP29590 882 aa18.23■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PDK4Q16654 411 aa18.23■□□□□ 0.51
TRAF3IP1-201ENST00000373327 CAPRIN2Q6IMN6 1127 aaKnown RBP18.23■□□□□ 0.51
TRAF3IP1-201ENST00000373327 TRMT10BQ6PF06 316 aaKnown RBP18.23■□□□□ 0.51
TRAF3IP1-201ENST00000373327 PLEKHH3Q7Z736 793 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms