RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ATG2BQ96BY7 2078 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 GPR179Q6PRD1 2367 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 PAPSS1O43252 624 aaPredicted RBP20.93■□□□□ 0.94
TMEM53-205ENST00000372244 SART1O43290 800 aaKnown RBP20.93■□□□□ 0.94
TMEM53-205ENST00000372244 HMBSP08397 361 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 CDK11BP21127 795 aaKnown RBP20.93■□□□□ 0.94
TMEM53-205ENST00000372244 CORO1AP31146 461 aaKnown RBP20.93■□□□□ 0.94
TMEM53-205ENST00000372244 GRIA2P42262 883 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 KLK7P49862 253 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 NRLP54845 237 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 PDCLQ13371 301 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 RAPGEF1Q13905 1077 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 FKBP15Q5T1M5 1219 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 ZC3H14Q6PJT7 736 aaKnown RBP20.93■□□□□ 0.94
TMEM53-205ENST00000372244 DHX40Q8IX18 779 aaKnown RBP20.93■□□□□ 0.94
TMEM53-205ENST00000372244 AOPEPQ8N6M6 819 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 ANKRD20A12PQ8NF67 263 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 CCDC26Q8TAB7 109 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 PLD4Q96BZ4 506 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 P2RY11Q96G91 374 aa20.93■□□□□ 0.94
TMEM53-205ENST00000372244 WDR87Q6ZQQ6 2873 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 EP300Q09472 2414 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-205ENST00000372244 LGALS16A8MUM7 142 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-205ENST00000372244 E5RJQ4 531 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 LILRB5O75023 590 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 KAT7O95251 611 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 CHRM1P11229 460 aaPredicted RBP20.92■□□□□ 0.94
TMEM53-205ENST00000372244 KRT9P35527 623 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 CHKAP35790 457 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 ANO4Q32M45 955 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 FAM217AQ8IXS0 508 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 USP33Q8TEY7 942 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 CPXM1Q96SM3 734 aa20.92■□□□□ 0.94
TMEM53-205ENST00000372244 FAM186AA6NE01 2351 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 F8VZ95 297 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 CACNG3O60359 315 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 TULP3O75386 442 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 ATP1A3P13637 1013 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 CYP11B1P15538 503 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 TNFRSF4P43489 277 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 TPGS1Q6ZTW0 290 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 DENND1CQ8IV53 801 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 SFTPA1Q8IWL2 248 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 NAT16Q8N8M0 369 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 ATRIPQ8WXE1 791 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 DDX1Q92499 740 aaKnown RBP20.91■□□□□ 0.94
TMEM53-205ENST00000372244 GOLGA1Q92805 767 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 NKD2Q969F2 451 aaPredicted RBP20.91■□□□□ 0.94
TMEM53-205ENST00000372244 ERGIC2Q96RQ1 377 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 BBS2Q9BXC9 721 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 DEC1Q9P2X7 70 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 STOML2Q9UJZ1 356 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 FBXO10Q9UK96 956 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 DAAM1Q9Y4D1 1078 aa20.91■□□□□ 0.94
TMEM53-205ENST00000372244 EPHB6O15197 1021 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 PENKP01210 267 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-205ENST00000372244 IGLV3-27P01718 113 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 TYRP14679 529 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 ZNF165P49910 485 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 SYT13Q7L8C5 426 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 CPXM2Q8N436 756 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 RPLP0P6Q8NHW5 317 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 PPP1R13BQ96KQ4 1090 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 ARHGEF4Q9NR80 690 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 FAM207AQ9NSI2 230 aaPredicted RBP20.9■□□□□ 0.94
TMEM53-205ENST00000372244 TJP2Q9UDY2 1190 aa20.9■□□□□ 0.94
TMEM53-205ENST00000372244 FANCMQ8IYD8 2048 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 ANTXRLA6NF34 631 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 SMTNL1A8MU46 457 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 NEDD8-MDP1E9PL57 170 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 APODP05090 189 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 NCAM1P13591 858 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 PTMSP20962 102 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 HOXC13P31276 330 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 CDH5P33151 784 aaPredicted RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 HARS2P49590 506 aaKnown RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 JAM2P57087 298 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 POLR2FP61218 127 aaKnown RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 YWHAZP63104 245 aaKnown RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 MRPS21P82921 87 aaKnown RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 UBXN1Q04323 297 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 SYCP1Q15431 976 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 PREPLQ4J6C6 727 aaPredicted RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 ASCL5Q7RTU5 278 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 PASD1Q8IV76 773 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 POLR3BQ9NW08 1133 aaPredicted RBP20.89■□□□□ 0.94
TMEM53-205ENST00000372244 NAALADL1Q9UQQ1 740 aa20.89■□□□□ 0.94
TMEM53-205ENST00000372244 PRR23AA6NEV1 266 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 GFRA2O00451 464 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 TRIM24O15164 1050 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 MSI1O43347 362 aaKnown RBP20.88■□□□□ 0.93
TMEM53-205ENST00000372244 CISD3P0C7P0 127 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 KIR2DL1P43626 348 aaPredicted RBP20.88■□□□□ 0.93
TMEM53-205ENST00000372244 RING1Q06587 406 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 DMWDQ09019 674 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 IQCB1Q15051 598 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 FYB2Q5VWT5 728 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 SYPL2Q5VXT5 272 aa20.88■□□□□ 0.93
TMEM53-205ENST00000372244 SUMF1Q8NBK3 374 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms