RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 NKIRAS1Q9NYS0 192 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 NCKIPSDQ9NZQ3 722 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PGAP2Q9UHJ9 254 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 TCEAL9Q9UHQ7 104 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 FEM1BQ9UK73 627 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MAD1L1Q9Y6D9 718 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 EREGO14944 169 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MCF2LO15068 1137 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ITM2AO43736 263 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 TLR2O60603 784 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 TSPAN1O60635 241 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 EDF1O60869 148 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 FKBP6O75344 327 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ABCB1P08183 1280 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 BRAFP15056 766 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 FOSL1P15407 271 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 THOP1P52888 689 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 NR1H2P55055 460 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 POLR2FP61218 127 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 UBXN2AP68543 259 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SF3B4Q15427 424 aaKnown RBP eCLIP9.16□□□□□ -0.942e-6■■■■■ 28.8
ATG4A-203ENST00000372232 TEAD4Q15561 434 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PPP2R5EQ16537 467 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF829Q3KNS6 432 aaPredicted RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 BTBD8Q5XKL5 378 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 FRMD5Q7Z6J6 570 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 LDHDQ86WU2 507 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 TPH2Q8IWU9 490 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 NIM1KQ8IY84 436 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 ELMOD1Q8N336 334 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 DCLK2Q8N568 766 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 METTL13Q8N6R0 699 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 UBR7Q8N806 425 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 LSMEM1Q8N8F7 131 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 FAM172AQ8WUF8 416 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 NSL1Q96IY1 281 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 RUNDC3BQ96NL0 473 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 BCAS3Q9H6U6 928 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 SIAEQ9HAT2 523 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PALMDQ9NP74 551 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 OLFML3Q9NRN5 406 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 FBXO28Q9NVF7 368 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 MTRF1LQ9UGC7 380 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PADI4Q9UM07 663 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 RBMX2Q9Y388 322 aaKnown RBP9.16□□□□□ -0.94
ATG4A-203ENST00000372232 PSME4Q14997 1843 aa9.16□□□□□ -0.94
ATG4A-203ENST00000372232 WNT10BO00744 389 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 DENRO43583 198 aaKnown RBP9.15□□□□□ -0.94
ATG4A-203ENST00000372232 CHMP2AO43633 222 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 IDH3BO43837 385 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 CALUO43852 315 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-203ENST00000372232 GAS7O60861 476 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 RSL1D1O76021 490 aaKnown RBP9.15□□□□□ -0.94
ATG4A-203ENST00000372232 MICAL2O94851 1124 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ASNSP08243 561 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 GARTP22102 1010 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 PRELPP51888 382 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 PTENP60484 403 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ACTR3P61158 418 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 CXCL9Q07325 125 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 C15orf59Q2T9L4 293 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF568Q3ZCX4 644 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 AAGABQ6PD74 315 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 C1orf186Q6ZWK4 172 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 USP43Q70EL4 1123 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ZNF598Q86UK7 904 aaKnown RBP9.15□□□□□ -0.94
ATG4A-203ENST00000372232 SCYL3Q8IZE3 742 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 AHI1Q8N157 1196 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 TTC30BQ8N4P2 665 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ATP6V0D2Q8N8Y2 350 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 FBXO25Q8TCJ0 367 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 DPF3Q92784 378 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 NT5C1AQ9BXI3 368 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 TRIM31Q9BZY9 425 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 KLC2Q9H0B6 622 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 DEFB129Q9H1M3 183 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 TNKS2Q9H2K2 1166 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 EHMT1Q9H9B1 1298 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 C17orf75Q9HAS0 396 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 MRGBPQ9NV56 204 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ARL8BQ9NVJ2 186 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 TAS2R1Q9NYW7 299 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ARMCX3Q9UH62 379 aaPredicted RBP9.15□□□□□ -0.94
ATG4A-203ENST00000372232 PPM1HQ9ULR3 514 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 PTCH2Q9Y6C5 1203 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 PFASO15067 1338 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 ADGRA3Q8IWK6 1321 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 SMCHD1A6NHR9 2005 aa9.15□□□□□ -0.94
ATG4A-203ENST00000372232 CENPBD1B2RD01 187 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 H3BSA7 217 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 RGS13O14921 159 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 KIAA0391O15091 583 aaKnown RBP9.15□□□□□ -0.95
ATG4A-203ENST00000372232 SH3BP5O60239 455 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 GUCY1B2O75343 617 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 SULT1C4O75897 302 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 AKAP3O75969 853 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 USP1O94782 785 aa9.15□□□□□ -0.95
ATG4A-203ENST00000372232 ESRRBO95718 433 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms