RNA–Protein interactions for RNA: ENST00000370885.8

EXOSC1-202, Transcript of exosome component 1, humanhuman

TSL 3 BASIC

Gene EXOSC1, Length 718 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-202ENST00000370885 DCDC2BA2VCK2 349 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 TBC1D3BA6NDS4 549 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 EPN2O95208 641 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 ZBED1O96006 694 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 VDRP11473 427 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 CORO1AP31146 461 aaKnown RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 RGS7P49802 495 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 TYRO3Q06418 890 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 BST2Q10589 180 aaKnown RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 PAK1Q13153 545 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 MAPK8IP2Q13387 824 aaPredicted RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 STIM1Q13586 685 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 PUM1Q14671 1186 aaKnown RBP eCLIP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 FYB2Q5VWT5 728 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 TCEAL6Q6IPX3 200 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 GJB7Q6PEY0 223 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 LCLAT1Q6UWP7 414 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 DGLUCYQ7Z3D6 616 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 PPM1KQ8N3J5 372 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 EDEM1Q92611 657 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 TCEAL3Q969E4 200 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 EXOC4Q96A65 974 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 CNOT6LQ96LI5 555 aaKnown RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 NT5C1BQ96P26 610 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 BBS2Q9BXC9 721 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 GTPBP4Q9BZE4 634 aaKnown RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 FAM124BQ9H5Z6 455 aaPredicted RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 ACP6Q9NPH0 428 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 DNAJC17Q9NVM6 304 aaKnown RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 DEC1Q9P2X7 70 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 SFMBT1Q9UHJ3 866 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 MBD1Q9UIS9 605 aaPredicted RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 AJAP1Q9UKB5 411 aaPredicted RBP11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 PCDHB4Q9Y5E5 795 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 NUP205Q92621 2012 aa11.52□□□□□ -0.57
EXOSC1-202ENST00000370885 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 SLC12A8A0AV02 714 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 WASH3PC4AMC7 463 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 GFRA2O00451 464 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 LRP3O75074 770 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 PENKP01210 267 aaPredicted RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 FYNP06241 537 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 TBXAS1P24557 533 aaPredicted RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 PSEN1P49768 467 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 BCAT1P54687 386 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 LMNB2Q03252 620 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 HS1BP3Q53T59 392 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 C10orf76Q5T2E6 689 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 BSPRYQ5W0U4 402 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 KIAA1211LQ6NV74 962 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 ERMP1Q7Z2K6 904 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 GPR161Q8N6U8 529 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 ZNF513Q8N8E2 541 aaPredicted RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 RBBP8NLQ8NC74 664 aaPredicted RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 KCTD13Q8WZ19 329 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 CD93Q9NPY3 652 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 MARCH2Q9P0N8 246 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 CYTH4Q9UIA0 394 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 CNTN6Q9UQ52 1028 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 STARD13Q9Y3M8 1113 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 GON4LQ3T8J9 2241 aa11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 TNRC6BQ9UPQ9 1833 aaKnown RBP11.51□□□□□ -0.57
EXOSC1-202ENST00000370885 BICDL2A1A5D9 508 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 P4HA2O15460 535 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 MSI1O43347 362 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 AFPP02771 609 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 PAEPP09466 180 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 ZNF806P0C7X5 589 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 RALAP11233 206 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 LCP1P13796 627 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 TRIM21P19474 475 aaKnown RBP11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 SLC9A1P19634 815 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 P2RY2P41231 377 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 PPP1R2P41236 205 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 SGSHP51688 502 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 DAOAP59103 153 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 CNGA2Q16280 664 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 GEN1Q17RS7 908 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 MAP7D1Q3KQU3 841 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 BTBD8Q5XKL5 378 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 PMS2CLQ68D20 193 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 TMEM215Q68D42 235 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 GRAMD4Q6IC98 578 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 DENND1BQ6P3S1 775 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 SASS6Q6UVJ0 657 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 DENND1CQ8IV53 801 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 FAM217AQ8IXS0 508 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 HMGB4Q8WW32 186 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 MYEOVQ96EZ4 313 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 LOXL4Q96JB6 756 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 CRACR2AQ9BSW2 395 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 SLC6A17Q9H1V8 727 aa11.5□□□□□ -0.57
EXOSC1-202ENST00000370885 LSM7Q9UK45 103 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms