RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 KCNK18Q7Z418 384 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 CNNM3Q8NE01 707 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ARMC2Q8NEN0 867 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SLC22A17Q8WUG5 538 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 METTL21AQ8WXB1 218 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 CUL5Q93034 780 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ZBTB9Q96C00 473 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 PANX2Q96RD6 677 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 AMNQ9BXJ7 453 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 GORASP2Q9H8Y8 452 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SNX15Q9NRS6 342 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 ANO10Q9NW15 660 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 NMRK1Q9NWW6 199 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 KCNJ14Q9UNX9 436 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 SIK3Q9Y2K2 1263 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 COL1A2P08123 1366 aa4.12□□□□□ -1.75
MCF2-203ENST00000370576 A0A1W2PPL8 197 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 GLTPD2A6NH11 291 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MYO1FO00160 1098 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 NDUFS8O00217 210 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SPOPO43791 374 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SIN3BO75182 1162 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CFBP00751 764 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 NR3C2P08235 984 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 TMIGD3P0DMS9 266 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 MYBP10242 640 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PROZP22891 400 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DNAJB1P25685 340 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 KRT9P35527 623 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CASP3P42574 277 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ALDH9A1P49189 494 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SPP2Q13103 211 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CUL2Q13617 745 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ZNF792Q3KQV3 632 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CCDC14Q49A88 953 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 LRCH2Q5VUJ6 765 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SLFN13Q68D06 897 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ZNF600Q6ZNG1 722 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 USP49Q70CQ1 688 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 TMEM200AQ86VY9 491 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MICU3Q86XE3 530 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SCML4Q8N228 414 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 NUDCD1Q96RS6 583 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MXRA8Q9BRK3 442 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 AARSD1Q9BTE6 412 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 GPR62Q9BZJ7 368 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ZNF552Q9H707 407 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 EHD3Q9NZN3 535 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SSX2IPQ9Y2D8 614 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ZKSCAN5Q9Y2L8 839 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 NCANO14594 1321 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DENND4AQ7Z401 1863 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ZBTB42B2RXF5 422 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 H0YIV9 168 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DDX39AO00148 427 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 ANGPT2O15123 496 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SCAMP1O15126 338 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 AXIN1O15169 862 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MSH4O15457 936 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ARHGAP6O43182 974 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CBR3O75828 277 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 FKBP9O95302 570 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SMC2O95347 1197 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ITGBL1O95965 494 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 ATP2A2P16615 1042 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 PEX2P28328 305 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 RFC1P35251 1148 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 TAGLN2P37802 199 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 CLCNKAP51800 687 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 POLR2FP61218 127 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 ADAM17P78536 824 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PRKG1Q13976 671 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 TRIM71Q2Q1W2 868 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 DNTTIP2Q5QJE6 756 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 EXOSC6Q5RKV6 272 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 FAM173BQ6P4H8 233 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 FKBP9P1Q75LS8 142 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 B4GALNT4Q76KP1 1039 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 KANSL1Q7Z3B3 1105 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SULF2Q8IWU5 870 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 C4orf19Q8IY42 314 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 ALDH16A1Q8IZ83 802 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 TRIML2Q8N7C3 387 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 OR1N1Q8NGS0 311 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 LMO3Q8TAP4 145 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 PIBF1Q8WXW3 757 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 CCDC51Q96ER9 411 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 GAS2L1Q99501 681 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 ZKSCAN3Q9BRR0 538 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 APOL5Q9BWW9 433 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 MOV10L1Q9BXT6 1211 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 ANO3Q9BYT9 981 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 GCOM2Q9BZD3 368 aaPredicted RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 UPF3AQ9H1J1 476 aaKnown RBP4.11□□□□□ -1.75
MCF2-203ENST00000370576 SCPEP1Q9HB40 452 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 B4GALT6Q9UBX8 382 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 DACH1Q9UI36 760 aa4.11□□□□□ -1.75
MCF2-203ENST00000370576 SLC39A10Q9ULF5 831 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms