RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CAPRIN2Q6IMN6 1127 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 DENND5BQ6ZUT9 1274 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TRPM8Q7Z2W7 1104 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PIGZQ86VD9 579 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ARMC2Q8NEN0 867 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MDM1Q8TC05 714 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 KCNV2Q8TDN2 545 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ZNF516Q92618 1163 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PTPRN2Q92932 1015 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PABPC5Q96DU9 382 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SERPINB11Q96P15 392 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SERPINI1Q99574 410 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MTIF3Q9H2K0 278 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MRGBPQ9NV56 204 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ANGPTL3Q9Y5C1 460 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ACTL7BQ9Y614 415 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MYH15Q9Y2K3 1946 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ERI2A8K979 691 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ZBBXA8MT70 800 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TRDMT1O14717 391 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 RGS20O76081 388 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 CYBBP04839 570 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 NCF2P19878 526 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MATKP42679 507 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 FLT3LGP49771 235 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SCNN1GP51170 649 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 NBPF20Q3BBV1 942 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC10A6Q3KNW5 377 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC45A4Q5BKX6 768 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ANKRD20A8PQ5CZ79 823 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PPP1R26Q5T8A7 1209 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 RNF219Q5W0B1 726 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 STRADAQ7RTN6 431 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MCUQ8NE86 351 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 USP33Q8TEY7 942 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 CENPTQ96BT3 561 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM84AQ96KN4 292 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SNX27Q96L92 541 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 GBP5Q96PP8 586 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 DUSP16Q9BY84 665 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ULBP1Q9BZM6 244 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 CNGB3Q9NQW8 809 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 C20orf96Q9NUD7 363 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 GGT7Q9UJ14 662 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MTO1Q9Y2Z2 717 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TIMM13Q9Y5L4 95 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 RPS6KL1Q9Y6S9 549 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 LY75O60449 1722 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 KIAA1551Q9HCM1 1747 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 IGKV6D-21A0A0A0MT36 114 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 CCT8L1PA6NM43 557 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TIMM44O43615 452 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 EDIL3O43854 480 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 RTN3O95197 1032 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ETFBP38117 255 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 NNMTP40261 264 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 XRCC4Q13426 336 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 C15orf59Q2T9L4 293 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SWT1Q5T5J6 900 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 LDLRAD1Q5T700 205 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 KCNT2Q6UVM3 1135 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 XYLT1Q86Y38 959 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 COLGALT1Q8NBJ5 622 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SLC4A11Q8NBS3 891 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 IPMKQ8NFU5 416 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 LMO3Q8TAP4 145 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 NKD2Q969F2 451 aaPredicted RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ATP6V1E2Q96A05 226 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 RMDN1Q96DB5 314 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 CPXM1Q96SM3 734 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 SNRNP25Q9BV90 132 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TRIM4Q9C037 500 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 MANSC1Q9H8J5 431 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 ETNK1Q9HBU6 452 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 TLR8Q9NR97 1041 aaKnown RBP5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 PCMTD2Q9NV79 361 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 EPS15L1Q9UBC2 864 aa5.49□□□□□ -1.53
SMNDC1-202ENST00000369603 DDX60LQ5H9U9 1706 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TREHO43280 583 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DIAPH2O60879 1101 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 GLRA3O75311 464 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DAB1O75553 588 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 UPP2O95045 317 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 FAM163BP0C2L3 166 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PRKAR2AP13861 404 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 HADHAP40939 763 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ELK3P41970 407 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 BIRC2Q13490 618 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 IRF5Q13568 498 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 USP10Q14694 798 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 TRADDQ15628 312 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 ATP13A4Q4VNC1 1196 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 RABGAP1LQ5R372 815 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 DCLRE1AQ6PJP8 1040 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PSTKQ8IV42 348 aaKnown RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 EFHBQ8N7U6 833 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 PLEKHO2Q8TD55 490 aa5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 RPRD1AQ96P16 312 aaPredicted RBP5.48□□□□□ -1.53
SMNDC1-202ENST00000369603 MRPL45Q9BRJ2 306 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms