RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 SP9P0CG40 484 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CTAGE8P0CG41 777 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CD19P15391 556 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 GJA1P17302 382 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 ABCB4P21439 1286 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 BCAT1P54687 386 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 BST2Q10589 180 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 PDCLQ13371 301 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 GRM2Q14416 872 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 PTPN20Q4JDL3 420 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 GLE1Q53GS7 698 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 LCE2DQ5TA82 110 aaPredicted RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 TANGO2Q6ICL3 276 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 POLNQ7Z5Q5 900 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 DAAM2Q86T65 1068 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CTAGE6Q86UF2 777 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CTAGE4Q8IX94 777 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 MMGT1Q8N4V1 131 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 DCLK2Q8N568 766 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 GPR161Q8N6U8 529 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 EIF1ADQ8N9N8 165 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 PJA1Q8NG27 643 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 IPO4Q8TEX9 1081 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 NXPE3Q969Y0 559 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 TCEAL4Q96EI5 215 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 HEXIM2Q96MH2 286 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 NAP1L3Q99457 506 aaPredicted RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 HINFPQ9BQA5 517 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CORO1BQ9BR76 489 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 SELENOOQ9BVL4 669 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 NUP85Q9BW27 656 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CYP4F11Q9HBI6 524 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 CSNK1G1Q9HCP0 422 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 SEPT11Q9NVA2 429 aaKnown RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 DLGAP2Q9P1A6 1054 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 HESX1Q9UBX0 185 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 TSPAN16Q9UKR8 245 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 EFR3BQ9Y2G0 817 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 TIMM13Q9Y5L4 95 aaPredicted RBP9.21□□□□□ -0.94
SNX27-201ENST00000368838 SDK1Q7Z5N4 2213 aa9.21□□□□□ -0.94
SNX27-201ENST00000368838 SPAG17Q6Q759 2223 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 GPR179Q6PRD1 2367 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 EML5Q05BV3 1969 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 MYO16Q9Y6X6 1858 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 TARSL2A2RTX5 802 aaKnown RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 XPO1O14980 1071 aaKnown RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 SART1O43290 800 aaKnown RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 PSTPIP1O43586 416 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ATP9BO43861 1147 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 C1RP00736 705 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 LRG1P02750 347 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 OR4Q2P0C623 313 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ODC1P11926 461 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ELF1P32519 619 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 PTPN7P35236 360 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 PCK1P35558 622 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 SOX11P35716 441 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 CCR2P41597 374 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 PAFAH1B1P43034 410 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 NAP1L1P55209 391 aaKnown RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 MRPL58Q14197 206 aaKnown RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 MLF2Q15773 248 aaPredicted RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 CTXN3Q4LDR2 81 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 SLC44A4Q53GD3 710 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 TSSK4Q6SA08 328 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ANKS3Q6ZW76 656 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 MTSS1LQ765P7 747 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 SLC26A9Q7LBE3 791 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 XYLT1Q86Y38 959 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 C1orf210Q8IVY1 113 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 KIAA2013Q8IYS2 634 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 UBL4BQ8N7F7 174 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 B3GALNT2Q8NCR0 500 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 OR6B3Q8NGW1 331 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 MYCBPAPQ8TBZ2 947 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 CPA5Q8WXQ8 436 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 PKMYT1Q99640 499 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 DUSP16Q9BY84 665 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 SPATA6Q9NWH7 488 aaPredicted RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 HMGXB4Q9UGU5 601 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 BACE2Q9Y5Z0 518 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ZFP37Q9Y6Q3 630 aaPredicted RBP9.2□□□□□ -0.94
SNX27-201ENST00000368838 SPTBN2O15020 2390 aa9.2□□□□□ -0.94
SNX27-201ENST00000368838 ANAPC1Q9H1A4 1944 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 KANSL1LA0AUZ9 987 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 TMCO5BA8MYB1 307 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 ZNF487B1APH4 448 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 ENC1O14682 589 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 KRT3P12035 628 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 MYL4P12829 197 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 PTPN2P17706 415 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 PTPN1P18031 435 aaKnown RBP9.19□□□□□ -0.94
SNX27-201ENST00000368838 HOXA9P31269 272 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 RAP1GAPP47736 663 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 SLC8A3P57103 927 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 STARD6P59095 220 aa9.19□□□□□ -0.94
SNX27-201ENST00000368838 COPS2P61201 443 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms