RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KLHDC10Q6PID8 442 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 TMEM139Q8IV31 216 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 YAF2Q8IY57 180 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 BPIFB1Q8TDL5 484 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 RXFP2Q8WXD0 754 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 ELSPBP1Q96BH3 223 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 ARHGEF26Q96DR7 871 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 ZFYVE19Q96K21 471 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 ZFRQ96KR1 1074 aaKnown RBP14.5□□□□□ -0.09
TPM3-211ENST00000368531 CFAP57Q96MR6 1250 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 SMOC2Q9H3U7 446 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 KIF9Q9HAQ2 790 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 TRPV4Q9HBA0 871 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 CD320Q9NPF0 282 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 PARVAQ9NVD7 372 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 PRUNE2Q8WUY3 3088 aa14.5□□□□□ -0.09
TPM3-211ENST00000368531 KIF26AQ9ULI4 1882 aaPredicted RBP14.49□□□□□ -0.09
TPM3-211ENST00000368531 ANKRD62A6NC57 917 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 C19orf67A6NJJ6 358 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 ECI2O75521 394 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 STC2O76061 302 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 NDUFA10O95299 355 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 MYBL1P10243 752 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 GPD1P21695 349 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 WEE1P30291 646 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 GDI1P31150 447 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 GSCP56915 257 aaPredicted RBP14.49□□□□□ -0.09
TPM3-211ENST00000368531 TBX4P57082 545 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 COG7P83436 770 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 ZNF77Q15935 545 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 C15orf59Q2T9L4 293 aaPredicted RBP14.49□□□□□ -0.09
TPM3-211ENST00000368531 PLEKHA7Q6IQ23 1121 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 CC2D1AQ6P1N0 951 aaPredicted RBP14.49□□□□□ -0.09
TPM3-211ENST00000368531 BEND5Q7L4P6 421 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 RNF135Q8IUD6 432 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 LRRC8AQ8IWT6 810 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 GJD3Q8N144 294 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 SLC44A3Q8N4M1 653 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 CTNNBL1Q8WYA6 563 aaPredicted RBP14.49□□□□□ -0.09
TPM3-211ENST00000368531 E2F7Q96AV8 911 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 TBCBQ99426 244 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 NPY6RQ99463 290 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 DDX23Q9BUQ8 820 aaKnown RBP14.49□□□□□ -0.09
TPM3-211ENST00000368531 DDIT4Q9NX09 232 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 IGSF9Q9P2J2 1179 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 STAP1Q9ULZ2 295 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 TFR2Q9UP52 801 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 PCDHA13Q9Y5I0 950 aa14.49□□□□□ -0.09
TPM3-211ENST00000368531 C2CD4BA6NLJ0 364 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 EIF3CLB5ME19 914 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 IPO7O95373 1038 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 PSMC3P17980 439 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 SDC4P31431 198 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 GBP1P32455 592 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 DEUP1Q05D60 604 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 USP4Q13107 963 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 TRIP4Q15650 581 aaPredicted RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 PPP1R15BQ5SWA1 713 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 SH3PXD2AQ5TCZ1 1133 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 DDX42Q86XP3 938 aaKnown RBP eCLIP14.48□□□□□ -0.09
TPM3-211ENST00000368531 MFSD6LQ8IWD5 586 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 ACRBPQ8NEB7 543 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 RNF34Q969K3 372 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 SERPINB11Q96P15 392 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 EIF3CQ99613 913 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 DESI2Q9BSY9 194 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 TRMT61BQ9BVS5 477 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 NUP85Q9BW27 656 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 ADAM33Q9BZ11 813 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 MRPL47Q9HD33 250 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 THG1LQ9NWX6 298 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 OBP2AQ9NY56 170 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 CTTNBP2NLQ9P2B4 639 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 LSM7Q9UK45 103 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 HBS1LQ9Y450 684 aaKnown RBP14.48□□□□□ -0.09
TPM3-211ENST00000368531 WNT6Q9Y6F9 365 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 C5orf42Q9H799 3197 aa14.48□□□□□ -0.09
TPM3-211ENST00000368531 COL6A3P12111 3177 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 TICRRQ7Z2Z1 1910 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 IRAK2O43187 625 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 NARSO43776 548 aaKnown RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 LCA5LO95447 670 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 KLKB1P03952 638 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 CYP1A2P05177 515 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 TMEM253P0C7T8 217 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 ATXN8OSP0DMR3 200 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 CORO1AP31146 461 aaKnown RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 ATXN1P54253 815 aaKnown RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 OGDHQ02218 1023 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 TDGQ13569 410 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 SLC25A52Q3SY17 297 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 CCDC14Q49A88 953 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 RAB6CQ53S08 254 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 ZC3H12AQ5D1E8 599 aaKnown RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 OTUD1Q5VV17 481 aaPredicted RBP14.47□□□□□ -0.09
TPM3-211ENST00000368531 TRIM68Q6AZZ1 485 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 DENND1CQ8IV53 801 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 BBS7Q8IWZ6 715 aa14.47□□□□□ -0.09
TPM3-211ENST00000368531 TTC8Q8TAM2 541 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms