RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 C18orf8Q96DM3 657 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SHDQ96IW2 340 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 HAUS4Q9H6D7 363 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 C8orf33Q9H7E9 229 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 POPDC2Q9HBU9 364 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 LTB4R2Q9NPC1 389 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 LSM7Q9UK45 103 aaKnown RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 CAPN11Q9UMQ6 739 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 NDRG2Q9UN36 371 aaKnown RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SLC9A3R1O14745 358 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 NFATC1O95644 943 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 CORO1AP31146 461 aaKnown RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 CASP14P31944 242 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 UBXN2BQ14CS0 331 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 DHCR24Q15392 516 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ASTLQ6HA08 431 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 RHBDF2Q6PJF5 856 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SARM1Q6SZW1 724 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZNF852Q6ZMS4 543 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 TRIM72Q6ZMU5 477 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SLC26A9Q7LBE3 791 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZNF571Q7Z3V5 609 aaPredicted RBP15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 PHLDB2Q86SQ0 1253 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 TAC4Q86UU9 113 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 DEFB106AQ8N104 65 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZNF687Q8N1G0 1237 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 FAM3CQ92520 227 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 SLC2A13Q96QE2 648 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 C11orf70Q9BRQ4 267 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 ASNSD1Q9NWL6 643 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 TBC1D14Q9P2M4 693 aa15.74■□□□□ 0.11
SMPDL3A-201ENST00000368440 GOLGA8SH3BPF8 625 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 CAPN9O14815 690 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 DCNP07585 359 aaKnown RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 CCDC172P0C7W6 258 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 GLULP15104 373 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 AOC1P19801 751 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 MMP8P22894 467 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 PRKCIP41743 596 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 MLLT6P55198 1093 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZBED6P86452 979 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 CENPCQ03188 943 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 PTP4A2Q12974 167 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 PON2Q15165 354 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 TRIP4Q15650 581 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 EFHC1Q5JVL4 640 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 LY6G5CQ5SRR4 150 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 TOGARAM2Q6ZUX3 1019 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 BEND5Q7L4P6 421 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 RALGPS2Q86X27 583 aaPredicted RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 DENND1CQ8IV53 801 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 VSTM4Q8IW00 320 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 SUGP1Q8IWZ8 645 aaKnown RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 CCDC105Q8IYK2 499 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 PLD4Q96BZ4 506 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 P2RY11Q96G91 374 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 TAS2R14Q9NYV8 317 aa15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 AGO1Q9UL18 857 aaKnown RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 HBS1LQ9Y450 684 aaKnown RBP15.73■□□□□ 0.11
SMPDL3A-201ENST00000368440 MAN2B1O00754 1011 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 HSF2BPO75031 334 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 DAB1O75553 588 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 GLI1P08151 1106 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 SNX16P57768 344 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 KLHL30Q0D2K2 578 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 DCAF6Q58WW2 860 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 FAM102AQ5T9C2 384 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 HGSNATQ68CP4 663 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 SPECC1LQ69YQ0 1117 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 TMEM25Q86YD3 366 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZNF397Q8NF99 534 aaPredicted RBP15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 OTUB2Q96DC9 234 aa15.72■□□□□ 0.11
SMPDL3A-201ENST00000368440 FAM170BA6NMN3 283 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 IGLV3-25P01717 112 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 IGLV3-27P01718 113 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 AVPR2P30518 371 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 NSFP46459 744 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 CLCN5P51795 746 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 FZD5Q13467 585 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TRNP1Q6NT89 227 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 C12orf40Q86WS4 652 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 DNAAF5Q86Y56 855 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZDHHC17Q8IUH5 632 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 MSANTD4Q8NCY6 345 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 MSANTD3Q96H12 275 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 ADAM33Q9BZ11 813 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 FBRSL1Q9HCM7 1045 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 SPHK2Q9NRA0 654 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 LUC7L2Q9Y383 392 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 SIT1Q9Y3P8 196 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 ZNF318Q5VUA4 2279 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 GJB6O95452 261 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TRUB2O95900 331 aaKnown RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 PLEKP08567 350 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 ADH5P11766 374 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TFE3P19532 575 aaPredicted RBP15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TNFAIP3P21580 790 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 OPRD1P41143 372 aa15.71■□□□□ 0.11
SMPDL3A-201ENST00000368440 TBX4P57082 545 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms