RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 PENKP01210 267 aaPredicted RBP16.83■□□□□ 0.28
CKS1B-202ENST00000368436 ENGP17813 658 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 NDUFV2P19404 249 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 RAD23BP54727 409 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 COG7P83436 770 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 RPL6Q02878 288 aaKnown RBP16.83■□□□□ 0.28
CKS1B-202ENST00000368436 ZNF252P-AS1Q0IIN9 211 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 UAP1L1Q3KQV9 507 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 ZNF394Q53GI3 561 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 RAB41Q5JT25 222 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 ARHGAP17Q68EM7 881 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 SLC4A11Q8NBS3 891 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 FBXL13Q8NEE6 735 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 CEP76Q8TAP6 659 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 TMEM176AQ96HP8 235 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 SLC6A14Q9UN76 642 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 SLC27A6Q9Y2P4 619 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 ATP6V1DQ9Y5K8 247 aa16.83■□□□□ 0.28
CKS1B-202ENST00000368436 ATXN2Q99700 1313 aaKnown RBP16.82■□□□□ 0.28
CKS1B-202ENST00000368436 ZBTB24O43167 697 aaPredicted RBP16.82■□□□□ 0.28
CKS1B-202ENST00000368436 STX10O60499 249 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 CHKAP35790 457 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 MXI1P50539 228 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 ZNF33AQ06730 810 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 DUOXA1Q1HG43 343 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 FYB2Q5VWT5 728 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 DCLK3Q9C098 648 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 PLK2Q9NYY3 685 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 RAD54BQ9Y620 910 aa16.82■□□□□ 0.28
CKS1B-202ENST00000368436 PCNX2A6NKB5 2137 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 UPK3BL1B0FP48 263 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 WASH3PC4AMC7 463 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 UPK3BL2E5RIL1 263 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 CETN3O15182 167 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 SERPINF2P08697 491 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 MAPK8P45983 427 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 MFAP3P55082 362 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 EFEMP1Q12805 493 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 PIGZQ86VD9 579 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 SLC41A1Q8IVJ1 513 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
CKS1B-202ENST00000368436 ARHGAP18Q8N392 663 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 DEFB119Q8N690 84 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 ANKRD52Q8NB46 1076 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 TATDN2Q93075 761 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 BHMTQ93088 406 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 MRGPRX1Q96LB2 322 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 ARID3AQ99856 593 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 CAPN10Q9HC96 672 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 CACNA2D2Q9NY47 1150 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 RASAL2Q9UJF2 1139 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 COQ4Q9Y3A0 265 aa16.81■□□□□ 0.28
CKS1B-202ENST00000368436 NPC1O15118 1278 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 CFIP05156 583 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 PROS1P07225 676 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 EPB41P11171 864 aaKnown RBP16.8■□□□□ 0.28
CKS1B-202ENST00000368436 CORO1AP31146 461 aaKnown RBP16.8■□□□□ 0.28
CKS1B-202ENST00000368436 ZNF132P52740 706 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 SEMA3BQ13214 749 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 ENPP2Q13822 863 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 COBLL1Q53SF7 1204 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 PM20D1Q6GTS8 502 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 RABEPKQ7Z6M1 372 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 PIP4P1Q86T03 277 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 METTL3Q86U44 580 aaKnown RBP16.8■□□□□ 0.28
CKS1B-202ENST00000368436 ZC3H3Q8IXZ2 948 aaKnown RBP16.8■□□□□ 0.28
CKS1B-202ENST00000368436 CPXM2Q8N436 756 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 DEFB124Q8NES8 71 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 ZNF419Q96HQ0 510 aaPredicted RBP16.8■□□□□ 0.28
CKS1B-202ENST00000368436 SLC6A17Q9H1V8 727 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 AGO1Q9UL18 857 aaKnown RBP16.8■□□□□ 0.28
CKS1B-202ENST00000368436 CYP8B1Q9UNU6 501 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 STON1Q9Y6Q2 735 aa16.8■□□□□ 0.28
CKS1B-202ENST00000368436 CKAP5Q14008 2032 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 PRCPP42785 496 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 YWHAGP61981 247 aaKnown RBP eCLIP16.79■□□□□ 0.28
CKS1B-202ENST00000368436 GFPT1Q06210 699 aaPredicted RBP16.79■□□□□ 0.28
CKS1B-202ENST00000368436 FOXC1Q12948 553 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 GEN1Q17RS7 908 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 CBWD6Q4V339 395 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 CBWD3Q5JTY5 395 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 CBWD5Q5RIA9 395 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 BHLHA9Q7RTU4 235 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 FAM217AQ8IXS0 508 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 TRIML1Q8N9V2 468 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 ERLEC1Q96DZ1 483 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 CCDC34Q96HJ3 373 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 PIWIL1Q96J94 861 aaKnown RBP16.79■□□□□ 0.28
CKS1B-202ENST00000368436 SLC32A1Q9H598 525 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 CD93Q9NPY3 652 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 FSCN3Q9NQT6 498 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 MARCH2Q9P0N8 246 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 THAP10Q9P2Z0 257 aaPredicted RBP16.79■□□□□ 0.28
CKS1B-202ENST00000368436 CEP295Q9C0D2 2601 aa16.79■□□□□ 0.28
CKS1B-202ENST00000368436 ZBED1O96006 694 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 HMBSP08397 361 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 TKTL1P51854 596 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 SLC8A3P57103 927 aa16.78■□□□□ 0.28
CKS1B-202ENST00000368436 PNOCQ13519 176 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms