RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 NINJ2Q9NZG7 142 aa12.69□□□□□ -0.38
PTPRK-203ENST00000368207 UMODL1Q5DID0 1318 aa12.69□□□□□ -0.38
PTPRK-203ENST00000368207 APOC4-APOC2K7ER74 178 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 RNF103O00237 685 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 APOC2P02655 101 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 HSP90AA5PQ58FG0 334 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 FOXR2Q6PJQ5 311 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 FAM183BPQ6ZVS7 135 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 GDF3Q9NR23 364 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 CDY1Q9Y6F8 540 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 SPTLC1O15269 473 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 SKAP2O75563 359 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 SUPT7LO94864 414 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 WEE1P30291 646 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 RGS4P49798 205 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 LRRC36Q1X8D7 754 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 DUSP28Q4G0W2 176 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 MARC1Q5VT66 337 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 NPNTQ6UXI9 565 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 C12orf56Q8IXR9 622 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 PRELID2Q8N945 189 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ALG3Q92685 438 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ELOVL4Q9GZR5 314 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 TKTL2Q9H0I9 626 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 POPDC2Q9HBU9 364 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 CYP4F12Q9HCS2 524 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 GLRA3O75311 464 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 NOL4O94818 638 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 MYBL2P10244 700 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 CD52P31358 61 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ZNF280AP59817 542 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 JAG1P78504 1218 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 MPP3Q13368 585 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 BTG3Q14201 252 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 LAYNQ6UX15 382 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ILDR2Q71H61 639 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 PRPF39Q86UA1 669 aaKnown RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 PCDHB18PQ96TA0 734 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 FBXO44Q9H4M3 255 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ENTPD7Q9NQZ7 604 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 TLR8Q9NR97 1041 aaKnown RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 HEY2Q9UBP5 337 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 VANGL2Q9ULK5 521 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ABCC6O95255 1503 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 MYO1DO94832 1006 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 TCN1P20061 433 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 MRPS6P82932 125 aaKnown RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 TRADDQ15628 312 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 TBCCQ15814 346 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 PDCD2Q16342 344 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 UNC93AQ86WB7 457 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 NUP93Q8N1F7 819 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 TRIML2Q8N7C3 387 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 MRPL40Q9NQ50 206 aaKnown RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 SLC24A2Q9UI40 661 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 ZNF214Q9UL59 606 aaPredicted RBP12.68□□□□□ -0.38
PTPRK-203ENST00000368207 AURKCQ9UQB9 309 aa12.68□□□□□ -0.38
PTPRK-203ENST00000368207 C2orf81A6NN90 581 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 TIMM44O43615 452 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 TSPAN3O60637 253 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 TMCC1O94876 653 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 PRKAR2AP13861 404 aaKnown RBP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 YWHAQP27348 245 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 AARSP49588 968 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 FLT3LGP49771 235 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 PHEXP78562 749 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 SP3Q02447 781 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 POLD3Q15054 466 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 SLIT2O94813 1529 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 SOWAHBA6NEL2 793 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 CST3P01034 146 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 MGAT1P26572 445 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 TARSP26639 723 aaKnown RBP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 ZCWPW2Q504Y3 356 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 ARHGAP15Q53QZ3 475 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 HGSNATQ68CP4 663 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 CHADLQ6NUI6 762 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 LRRN4Q8WUT4 740 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 APBA2Q99767 749 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 GOLGA2P5Q9HBQ8 144 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 RUVBL2Q9Y230 463 aaKnown RBP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 C2CD2Q9Y426 696 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 TMEM247A6NEH6 219 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 IGF2BP3O00425 579 aaKnown RBP eCLIP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 NCAM2O15394 837 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 RAMP2O60895 175 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 NLRP9Q7RTR0 991 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 PTAR1Q7Z6K3 402 aaPredicted RBP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 AGGF1Q8N302 714 aaeCLIP12.67□□□□□ -0.38
PTPRK-203ENST00000368207 B3GALNT2Q8NCR0 500 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 MTBPQ96DY7 904 aa12.67□□□□□ -0.38
PTPRK-203ENST00000368207 NCANO14594 1321 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 SRP72O76094 671 aaKnown RBP12.66□□□□□ -0.38
PTPRK-203ENST00000368207 MYL4P12829 197 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 STMN1P16949 149 aa12.66□□□□□ -0.38
PTPRK-203ENST00000368207 NPR3P17342 541 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms