RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.63□□□□□ -1.03
MRPL55-211ENST00000366738 ATXN2Q99700 1313 aaKnown RBP8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FAM170AA1A519 330 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 A8MXQ7 604 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 CYP26A1O43174 497 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 CAPNS1P04632 268 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 PLEKP08567 350 aaPredicted RBP8.62□□□□□ -1.03
MRPL55-211ENST00000366738 PDGFRBP09619 1106 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 BRD2P25440 801 aaKnown RBP8.62□□□□□ -1.03
MRPL55-211ENST00000366738 CLCN1P35523 988 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 KRT9P35527 623 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SOX5P35711 763 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 GALK1P51570 392 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 USP46P62068 366 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FAM193AP78312 1265 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ZBED6P86452 979 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ARID5AQ03989 594 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SMARCB1Q12824 385 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TRIM61Q5EBN2 209 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ANO7Q6IWH7 933 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FAM171BQ6P995 826 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ARMCX6Q7L4S7 300 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ENOSF1Q7L5Y1 443 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SYT13Q7L8C5 426 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 DPH6Q7L8W6 267 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ACOT1Q86TX2 421 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SLC47A2Q86VL8 602 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 MON1AQ86VX9 555 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FAM71AQ8IYT1 594 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 DCP1BQ8IZD4 617 aaKnown RBP8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TMEM86AQ8N2M4 240 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 C12orf29Q8N999 325 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TSTD1Q8NFU3 115 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SLC20A1Q8WUM9 679 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TFAP2BQ92481 460 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FAXDC2Q96IV6 333 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 PDLIM2Q96JY6 352 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 MYRFLQ96LU7 910 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SYT15Q9BQS2 421 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SNX25Q9H3E2 840 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 SLC32A1Q9H598 525 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 CRTAC1Q9NQ79 661 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FSCN3Q9NQT6 498 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 FAM49BQ9NUQ9 324 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TDP1Q9NUW8 608 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TMEM30AQ9NV96 361 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 THG1LQ9NWX6 298 aaKnown RBP8.62□□□□□ -1.03
MRPL55-211ENST00000366738 EBF1Q9UH73 591 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 CNTN6Q9UQ52 1028 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 DAAM1Q9Y4D1 1078 aa8.62□□□□□ -1.03
MRPL55-211ENST00000366738 ZNF638Q14966 1978 aaKnown RBP8.62□□□□□ -1.03
MRPL55-211ENST00000366738 TNRC6BQ9UPQ9 1833 aaKnown RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ANAPC1Q9H1A4 1944 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ADAMTS9Q9P2N4 1935 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 C2orf78A6NCI8 922 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 AKR1B15C9JRZ8 316 aaPredicted RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 CSH1P0DML2 217 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 CSH2P0DML3 217 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 SKILP12757 684 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 CCDC130P13994 396 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ENGP17813 658 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 DRD1P21728 446 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 GJA4P35212 333 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 GNL1P36915 607 aaPredicted RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 AVPR1AP37288 418 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 STAT1P42224 750 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 LHX1P48742 406 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 CACNA2D1P54289 1103 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 YWHAEP62258 255 aaKnown RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 TSPY1Q01534 308 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 SCAPQ12770 1279 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ZNF77Q15935 545 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 TAF12Q16514 161 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ASIC2Q16515 512 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 NFE2Q16621 373 aaPredicted RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 CFAP221Q4G0U5 840 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 USP39Q53GS9 565 aaKnown RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 MDH1BQ5I0G3 518 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 SFMBT2Q5VUG0 894 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 TAF3Q5VWG9 929 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 HGSNATQ68CP4 663 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 WDR59Q6PJI9 974 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 PIP4P1Q86T03 277 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 B3GALNT2Q8NCR0 500 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 EPS8L1Q8TE68 723 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 MYLPFQ96A32 169 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 JAKMIP2Q96AA8 810 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ACDQ96AP0 544 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 TRMT2BQ96GJ1 504 aaKnown RBP8.61□□□□□ -1.03
MRPL55-211ENST00000366738 TMEM176AQ96HP8 235 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 FAM81BQ96LP2 452 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 GCNAQ96QF7 691 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 DNAJC7Q99615 494 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 P2RY13Q9BPV8 354 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 NT5C1AQ9BXI3 368 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 EDEM3Q9BZQ6 932 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 LINC00597Q9H2U6 94 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 ABCB6Q9NP58 842 aa8.61□□□□□ -1.03
MRPL55-211ENST00000366738 EVLQ9UI08 416 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms