RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 VSTM1Q6UX27 236 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 C16orf71Q8IYS4 520 aaPredicted RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 SCARB1Q8WTV0 552 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 KIAA1191Q96A73 305 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 GRAMD1AQ96CP6 724 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 CCDC136Q96JN2 1154 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 CCDC138Q96M89 665 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 WDR24Q96S15 920 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 CINPQ9BW66 212 aaPredicted RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 ADGRE3Q9BY15 652 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 GEMIN8Q9NWZ8 242 aaKnown RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 GAR1Q9NY12 217 aaKnown RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 RGL1Q9NZL6 768 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 PCDHGB2Q9Y5G2 931 aa5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 HEMK1Q9Y5R4 338 aaPredicted RBP5.31□□□□□ -1.56
RNU4-28P-201ENST00000364739 SRGAP2BP0DMP2 458 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 CYP19A1P11511 503 aaPredicted RBP5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 ALADP13716 330 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 MMP13P45452 471 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 TBX4P57082 545 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 GAB1Q13480 694 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 KCNJ12Q14500 433 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 P3H1Q32P28 736 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 MRNIPQ6NTE8 343 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 DPP9Q86TI2 863 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 DENND1AQ8TEH3 1009 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZNF566Q969W8 418 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 C18orf8Q96DM3 657 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 FAM118BQ9BPY3 351 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZCWPW1Q9H0M4 648 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 VPS16Q9H269 839 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 EPS8L2Q9H6S3 715 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 MLXIPLQ9NP71 852 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 TMEM184CQ9NVA4 438 aa5.3□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZNF521Q96K83 1311 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 RASA4BC9J798 803 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 M0QZQ0 153 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 RRHO14718 337 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 RASA4O43374 803 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 RNF8O76064 485 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 EEF1GP26641 437 aaKnown RBP5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 TM4SF4P48230 202 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 JAK3P52333 1124 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 AK2P54819 239 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 WDR5P61964 334 aaKnown RBP5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 GHRHRQ02643 423 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 ZNF91Q05481 1191 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 HLTFQ14527 1009 aaKnown RBP eCLIP5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 PFKFB3Q16875 520 aaPredicted RBP5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 MAP9Q49MG5 647 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 C4orf46Q504U0 113 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 FAM90A2PQ658T7 463 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 TFAP2DQ7Z6R9 452 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 GLCCI1Q86VQ1 547 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 OR2C3Q8N628 320 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 PRSS3P2Q8NHM4 247 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 CERS4Q9HA82 394 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 CHST12Q9NRB3 414 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 ABHD10Q9NUJ1 306 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 TRNAU1APQ9NX07 287 aaKnown RBP5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 CEP83Q9Y592 693 aa5.29□□□□□ -1.56
RNU4-28P-201ENST00000364739 E5RJQ4 531 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 PODXLO00592 558 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 MYL1P05976 194 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 EGR1P18146 543 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 ABCB4P21439 1286 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 VPS41P49754 854 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 SEMA3BQ13214 749 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 PICALMQ13492 652 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 ATP1A4Q13733 1029 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 TRIP6Q15654 476 aaKnown RBP5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 ELF2Q15723 593 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 IZUMO3Q5VZ72 239 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 FBXO38Q6PIJ6 1188 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 PIK3AP1Q6ZUJ8 805 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 SRLQ86TD4 932 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 TM2D2Q9BX73 214 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 NUAK2Q9H093 628 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 AGO4Q9HCK5 861 aaKnown RBP5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 TMEM8AQ9HCN3 771 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 FSCN3Q9NQT6 498 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 ELOVL5Q9NYP7 299 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 SEMA5BQ9P283 1151 aa5.28□□□□□ -1.56
RNU4-28P-201ENST00000364739 CCDC187A0A096LP49 1063 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 PPEF2O14830 753 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 IDEP14735 1019 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 HSPA7P48741 367 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 DGKQP52824 942 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 MAPKAPK3Q16644 382 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 MPEG1Q2M385 716 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 SLC5A9Q2M3M2 681 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 USP17L6PQ6QN14 398 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 NANOGP1Q8N7R0 232 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 IGFBPL1Q8WX77 278 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 HIC2Q96JB3 615 aa5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 ZNF48Q96MX3 618 aaPredicted RBP5.27□□□□□ -1.57
RNU4-28P-201ENST00000364739 SIGLEC11Q96RL6 698 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms