RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 TACR3P29371 465 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 SLC5A2P31639 672 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 GNALP38405 381 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZNF91Q05481 1191 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 BFSP2Q13515 415 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 HIBCHQ6NVY1 386 aaPredicted RBP4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 SHC4Q6S5L8 630 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 KIAA0408Q6ZU52 694 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 PIGOQ8TEQ8 1089 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 ARL8BQ9NVJ2 186 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZMYND8Q9ULU4 1186 aaPredicted RBP4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 VPS4AQ9UN37 437 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 MAN2B2Q9Y2E5 1009 aa4.78□□□□□ -1.64
RNU6-553P-201ENST00000364047 ZSCAN9O15535 394 aaPredicted RBP4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 NCK2O43639 380 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 BMP15O95972 392 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 NBPF7P0C2Y1 421 aaPredicted RBP4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 HARSP12081 509 aaKnown RBP4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 TNFSF4P23510 183 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 GABRB3P28472 473 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 KCNJ12Q14500 433 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 LONRF1Q17RB8 773 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 ARL13BQ3SXY8 428 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 HSP90AB2PQ58FF8 381 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 TMEM196Q5HYL7 178 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 RAP1GAP2Q684P5 730 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 TXLNBQ8N3L3 684 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 GRAMD1AQ96CP6 724 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 SIGLEC11Q96RL6 698 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 NUAK2Q9H093 628 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 ABHD10Q9NUJ1 306 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 MTMR4Q9NYA4 1195 aa4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 FNDC1Q4ZHG4 1894 aaPredicted RBP4.77□□□□□ -1.65
RNU6-553P-201ENST00000364047 SPATA31A1Q5TZJ5 1347 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 ANO9A1A5B4 782 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 INPPL1O15357 1258 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 FGBP02675 491 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 IGKV2-30P06310 120 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 PECAM1P16284 738 aaPredicted RBP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 HOXD9P28356 352 aaPredicted RBP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 ID2Q02363 134 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 CFHR1Q03591 330 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 ATP1A4Q13733 1029 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 CNGA3Q16281 694 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 SLC5A9Q2M3M2 681 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 ARHGAP15Q53QZ3 475 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 FAM209BQ5JX69 171 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 FAM90A2PQ658T7 463 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 MRPL10Q7Z7H8 261 aaKnown RBP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 C11orf96Q7Z7L8 435 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 DPP9Q86TI2 863 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 KRT73Q86Y46 540 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 ZNF366Q8N895 744 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 COQ8BQ96D53 544 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 TMEM79Q9BSE2 394 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 EIF2AQ9BY44 585 aaKnown RBP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 GEMIN8Q9NWZ8 242 aaKnown RBP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 SEMA5BQ9P283 1151 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 AFG3L2Q9Y4W6 797 aa4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 HEMK1Q9Y5R4 338 aaPredicted RBP4.76□□□□□ -1.65
RNU6-553P-201ENST00000364047 FAM234BA2RU67 622 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 RASA4BC9J798 803 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 RASA4O43374 803 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 CAND2O75155 1236 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 VIPP01282 170 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 KRT18P05783 430 aaKnown RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 SLC3A2P08195 630 aaKnown RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 CYP19A1P11511 503 aaPredicted RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 EGR1P18146 543 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 RPS13P62277 151 aaKnown RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 HSF1Q00613 529 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 FAM110CQ1W6H9 321 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 SLC35G1Q2M3R5 365 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 P3H1Q32P28 736 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 SLC9C1Q4G0N8 1177 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 C10orf25Q5T742 122 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 TLDC1Q6P9B6 456 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 FBXO38Q6PIJ6 1188 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 CLASRPQ8N2M8 674 aaKnown RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 GLIS1Q8NBF1 620 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 C16orf52Q8NHV5 167 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 PARD3BQ8TEW8 1205 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 HMCESQ96FZ2 354 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 RIPOR3Q96MK2 946 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 EIF3CQ99613 913 aaKnown RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 RNF26Q9BY78 433 aaPredicted RBP4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 TMEM184CQ9NVA4 438 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 RGL1Q9NZL6 768 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 CEP83Q9Y592 693 aa4.75□□□□□ -1.65
RNU6-553P-201ENST00000364047 OR2W5A6NFC9 320 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 TTC34A8MYJ7 566 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 SOCS2O14508 198 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 RRHO14718 337 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 FGF18O76093 207 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 PLAUP00749 431 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 SRGAP2BP0DMP2 458 aa4.74□□□□□ -1.65
RNU6-553P-201ENST00000364047 MATN1P21941 496 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms