RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 CTIFO43310 598 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 DHX16O60231 1041 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PEX10O60683 326 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CBFA2T3O75081 653 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 LMNAP02545 664 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ITGB1P05556 798 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SPARCP09486 303 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZNF888P0CJ79 500 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 HGFP14210 728 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CD19P15391 556 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CHN1P15882 459 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CDH2P19022 906 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SPINK2P20155 84 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ITGALP20701 1170 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GCSHP23434 173 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PPIFP30405 207 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 UQCRC1P31930 480 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ABCD1P33897 745 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GRK5P34947 590 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 HADHAP40939 763 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PCP4P48539 62 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 AFF3P51826 1226 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 RPL7AP62424 266 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TIAL1Q01085 375 aaKnown RBP eCLIP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TAP2Q03519 686 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SLFN5Q08AF3 891 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 AIMP2Q13155 320 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CRYMQ14894 314 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ACOX1Q15067 660 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TBCCQ15814 346 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TBR1Q16650 682 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TMEM266Q2M3C6 531 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NOMO2Q5JPE7 1267 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NUGGCQ68CJ6 796 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TAPT1Q6NXT6 567 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CLEC9AQ6UXN8 241 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SYNE3Q6ZMZ3 975 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NFXL1Q6ZNB6 911 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GPRIN1Q7Z2K8 1008 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 XYLT1Q86Y38 959 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SLC15A3Q8IY34 581 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 OR4N4Q8N0Y3 316 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 C17orf53Q8N3J3 647 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 FSTL5Q8N475 847 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 KLHL36Q8N4N3 616 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TNIP2Q8NFZ5 429 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MZB1Q8WU39 189 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ATRIPQ8WXE1 791 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 HIC2Q96JB3 615 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CDHR1Q96JP9 859 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 YTHDC1Q96MU7 727 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NAP1L5Q96NT1 182 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 PNKPQ96T60 521 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 EIF3CQ99613 913 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TLR10Q9BXR5 811 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 REXO4Q9GZR2 422 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TMEM168Q9H0V1 697 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SMARCAD1Q9H4L7 1026 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CXorf36Q9H7Y0 433 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ATP8A2Q9NTI2 1148 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZDHHC7Q9NXF8 308 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ALKBH4Q9NXW9 302 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ADAM29Q9UKF5 820 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SARDHQ9UL12 918 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CDYLQ9Y232 598 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 DRG1Q9Y295 367 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MRPS17Q9Y2R5 130 aaKnown RBP4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NEU2Q9Y3R4 380 aa4.04□□□□□ -1.76
RNU6-1249P-201ENST00000363237 DRGXA6NNA5 263 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SMTNL1A8MU46 457 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ADM5C9JUS6 153 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SH2B2O14492 632 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MSTNO14793 375 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TNFSF14O43557 240 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GJB3O75712 270 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SEC14L2O76054 403 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 MTA2O94776 668 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 HEXIM1O94992 359 aaKnown RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CSPG5O95196 566 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GLI1P08151 1106 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 QDPRP09417 244 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 SPATA31D3P0C874 917 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 FCER1AP12319 257 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CHRM3P20309 590 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 EEF1DP29692 281 aaKnown RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 NTSR1P30989 418 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 HTR7P34969 479 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 EIF2DP41214 584 aaKnown RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TNNT3P45378 269 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CDR1P51861 262 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 RNASELQ05823 741 aaKnown RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 GOLGA8FQ08AF8 430 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 THOC5Q13769 683 aaKnown RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZNF568Q3ZCX4 644 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 ZNF766Q5HY98 468 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TMEM196Q5HYL7 178 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 METTL24Q5JXM2 366 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 CCDC144NLQ6NUI1 221 aa4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 DRICH1Q6PGQ1 229 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1249P-201ENST00000363237 TMEM108Q6UXF1 575 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms