RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NRDE2Q9H7Z3 1164 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 CHODLQ9H9P2 273 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 NOD2Q9HC29 1040 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 LIN7CQ9NUP9 197 aaKnown RBP4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 DKK3Q9UBP4 350 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 KCND3Q9UK17 655 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 UBE2J1Q9Y385 318 aaPredicted RBP4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 TSC22D4Q9Y3Q8 395 aa4.25□□□□□ -1.73
RNU6-28P-201ENST00000362378 CCDC196A0A1B0GTZ2 297 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 SAC3D1A6NKF1 404 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 A6NLC8 198 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 M0QZQ0 153 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 C1SP09871 688 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 ITGAMP11215 1152 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 CREB1P16220 341 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZNF20P17024 532 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 ADRA1DP25100 572 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 YY1P25490 414 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 PCSK6P29122 969 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 PTGS2P35354 604 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 TUBP50607 506 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 CLCN2P51788 898 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 GEMIN4P57678 1058 aaKnown RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 BLOC1S1P78537 153 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 LMOD3Q0VAK6 560 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 DNASE1L3Q13609 305 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 BMPR2Q13873 1038 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 DCTN1Q14203 1278 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 ANKRD1Q15327 319 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 CYP1B1Q16678 543 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 TXNRD1Q16881 649 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 P3H1Q32P28 736 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 NBPF8Q3BBV2 869 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZNF569Q5MCW4 686 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 SPDYAQ5MJ70 313 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 MTHFD1LQ6UB35 978 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 USP51Q70EK9 711 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 CEP70Q8NHQ1 597 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 RP9Q8TA86 221 aaKnown RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 KTI12Q96EK9 354 aaPredicted RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 REXO5Q96IC2 774 aaKnown RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 Q96MF0 132 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 PRR25Q96S07 402 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 EIF3CQ99613 913 aaKnown RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 DPCDQ9BVM2 203 aaPredicted RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 SLC26A6Q9BXS9 759 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 CCDC134Q9H6E4 229 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 FBXO28Q9NVF7 368 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 TERF2IPQ9NYB0 399 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 ANKFY1Q9P2R3 1169 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 TESQ9UGI8 421 aaKnown RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 DNAJC16Q9Y2G8 782 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 RRP7AQ9Y3A4 280 aaKnown RBP4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 PCDHB7Q9Y5E2 793 aa4.24□□□□□ -1.73
RNU6-28P-201ENST00000362378 MBD3L5A6NJ08 208 aaPredicted RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 M0QYT0 321 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 NKX2-8O15522 239 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 PEX1O43933 1283 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 CYP3A4P08684 503 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 DLDP09622 509 aaKnown RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 ZFXP17010 805 aaPredicted RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 ELF1P32519 619 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 LIFRP42702 1097 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 RXRGP48443 463 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 RBM5P52756 815 aaKnown RBP eCLIP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 TPTEP56180 551 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 SUMO2P61956 95 aaKnown RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 RBM6P78332 1123 aaKnown RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 DEUP1Q05D60 604 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAPK7Q13164 816 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 DLGAP5Q15398 846 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 FAM187BQ17R55 369 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 CTXN3Q4LDR2 81 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 HYIQ5T013 277 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 ACSM6Q6P461 480 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 PTCHD4Q6ZW05 846 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 PARS2Q7L3T8 475 aaKnown RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 RSRC2Q7L4I2 434 aaKnown RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 KRT27Q7Z3Y8 459 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAATS1Q7Z4T9 603 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 MRGPREQ86SM8 312 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 TSPYL6Q8N831 410 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 PNPLA1Q8N8W4 532 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 PCYOX1LQ8NBM8 494 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 SLC2A12Q8TD20 617 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 XAGE5Q8WWM1 108 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 NPIPB3Q92617 1050 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 FBXL20Q96IG2 436 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 FAR2Q96K12 515 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 PLEKHG4BQ96PX9 1271 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 REEP2Q9BRK0 252 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 AIFM2Q9BRQ8 373 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 JMJD4Q9H9V9 463 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAP3K20Q9NYL2 800 aaKnown RBP4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 LMTK3Q96Q04 1460 aa4.23□□□□□ -1.73
RNU6-28P-201ENST00000362378 MAST3O60307 1309 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 CCDC187A0A096LP49 1063 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 SEPT4O43236 478 aa4.22□□□□□ -1.73
RNU6-28P-201ENST00000362378 TMPRSS11DO60235 418 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms