RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 COQ6Q9Y2Z9 468 aa13.12□□□□□ -0.31
VAMP1-201ENST00000361716 TMEM221A6NGB7 291 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 TMX2-CTNND1H3BSU7 103 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 FBP2O00757 339 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ITM2AO43736 263 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 TMEM63AO94886 807 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 NR1H2P55055 460 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 C1orf220Q5T0J3 134 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 PDPK2PQ6A1A2 396 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 FRMD7Q6ZUT3 714 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 RAVER1Q8IY67 606 aaKnown RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 GPD1LQ8N335 351 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ZNF276Q8N554 614 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 CPT1BQ92523 772 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 CAMKK2Q96RR4 588 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 FOXP3Q9BZS1 431 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 NDEL1Q9GZM8 345 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 RPL22P35268 128 aaKnown RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 NLRP11P59045 1033 aaKnown RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ESRRGP62508 458 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 KLF1Q13351 362 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SPDYAQ5MJ70 313 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 LGSNQ5TDP6 509 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 PLEKHA7Q6IQ23 1121 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 DNAJC14Q6Y2X3 702 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SPOCD1Q6ZMY3 1216 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ZNF410Q86VK4 478 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 MYO1HQ8N1T3 1032 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 PHTF2Q8N3S3 785 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SYNJ2BP-COX16A0A087WUM0 186 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SIN3BO75182 1162 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SERPINA6P08185 405 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 CDH2P19022 906 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SOX11P35716 441 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 EMP3P54852 163 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 RPS6P62753 249 aaKnown RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 DLGAP5Q15398 846 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 FASTKD1Q53R41 847 aaKnown RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ZBTB41Q5SVQ8 909 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 WDR78Q5VTH9 848 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 POTEHQ6S545 545 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 CCDC80Q76M96 950 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 DDHD1Q8NEL9 900 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 EXD1Q8NHP7 514 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
VAMP1-201ENST00000361716 MARK4Q96L34 752 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 PLGRKTQ9HBL7 147 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 ADA2Q9NZK5 511 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 COX16Q9P0S2 106 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 SHOC2Q9UQ13 582 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 GINS2Q9Y248 185 aa13.11□□□□□ -0.31
VAMP1-201ENST00000361716 K7ERI5 159 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 P4HA2O15460 535 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 TGDSO95455 350 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 APRTP07741 180 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 SNRPAP09012 282 aaKnown RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 GSTT2P0CG29 244 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 GSTT2BP0CG30 244 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CD97P48960 835 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 PDAP1Q13442 181 aaKnown RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ITGA7Q13683 1181 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 HSF5Q4G112 596 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CIAPIN1Q6FI81 312 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 UNC45BQ8IWX7 931 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ZNF786Q8N393 782 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 BHLHE22Q8NFJ8 381 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 DIS3LQ8TF46 1054 aaKnown RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 SLITRK1Q96PX8 696 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CCDC106Q9BWC9 280 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 SENP6Q9GZR1 1112 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 POLR3FQ9H1D9 316 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ZC3H7BQ9UGR2 993 aaKnown RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 FIS1Q9Y3D6 152 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 SCINQ9Y6U3 715 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CXorf49A8MYA2 514 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ZNF536O15090 1300 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 KDM1AO60341 852 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ATP8B3O60423 1300 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 MTA2O94776 668 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ZBTB11O95625 1053 aaPredicted RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 LDHAP00338 332 aaKnown RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CDKL1Q00532 357 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 SULT2A1Q06520 285 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 CD300CQ08708 224 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 ITGADQ13349 1161 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 HNRNPDQ14103 355 aaKnown RBP13.1□□□□□ -0.31
VAMP1-201ENST00000361716 GPAT2Q6NUI2 795 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 BSNDQ8WZ55 320 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 HAUS8Q9BT25 410 aa13.1□□□□□ -0.31
VAMP1-201ENST00000361716 AGO2Q9UKV8 859 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms