RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 RRP15Q9Y3B9 282 aaKnown RBP14.31□□□□□ -0.12
CTR9-201ENST00000361367 TMEM120BA0PK00 339 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 GYG2O15488 501 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 MDH1P40925 334 aaKnown RBP14.3□□□□□ -0.12
CTR9-201ENST00000361367 MBTD1Q05BQ5 628 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 ARHGAP1Q07960 439 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 SZRD1Q7Z422 152 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 IRF2BP2Q7Z5L9 587 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 C22orf31O95567 290 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 NR2C2P49116 596 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 ZNF143P52747 638 aaPredicted RBP14.3□□□□□ -0.12
CTR9-201ENST00000361367 AMPD2Q01433 879 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 HTR3CQ8WXA8 447 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 PRMT1Q99873 361 aaKnown RBP14.3□□□□□ -0.12
CTR9-201ENST00000361367 MRPL42Q9Y6G3 142 aaKnown RBP14.3□□□□□ -0.12
CTR9-201ENST00000361367 HMOX2P30519 316 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 HNRNPH3P31942 346 aaKnown RBP14.3□□□□□ -0.12
CTR9-201ENST00000361367 KCNT2Q6UVM3 1135 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 PHF13Q86YI8 300 aaPredicted RBP14.3□□□□□ -0.12
CTR9-201ENST00000361367 KREMEN1Q96MU8 473 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 WWP1Q9H0M0 922 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 TMEM51Q9NW97 253 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 SRRDQ9UH36 339 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 MSRAQ9UJ68 235 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 DUOX1Q9NRD9 1551 aa14.3□□□□□ -0.12
CTR9-201ENST00000361367 LZTS3O60299 673 aaPredicted RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 MYO1DO94832 1006 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 GLI1P08151 1106 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ZC3H12AQ5D1E8 599 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 HECTD3Q5T447 861 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ILDR2Q71H61 639 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 KATNAL2Q8IYT4 538 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 RMDN2Q96LZ7 410 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 MRPL45Q9BRJ2 306 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 CENPKQ9BS16 269 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 EIF2AQ9BY44 585 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 UPF3AQ9H1J1 476 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 SLC27A5Q9Y2P5 690 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 C4BP0C0L5 1744 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 A0A1B0GUA9 196 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CLDN5O00501 218 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 RNASEH1O60930 286 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 CYP1A2P05177 515 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CSH1P0DML2 217 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CSH2P0DML3 217 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ZNF135P52742 658 aaPredicted RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 IL1RL1Q01638 556 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 PPP1R26Q5T8A7 1209 aaPredicted RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 NTPCRQ9BSD7 190 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 BRD8Q9H0E9 1235 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 THG1LQ9NWX6 298 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 WRAP73Q9P2S5 460 aaPredicted RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 OR12D3Q9UGF7 316 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 APOC4-APOC2K7ER74 178 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ARIH2O95376 493 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ANP32DO95626 131 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CST3P01034 146 aaPredicted RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 APOC2P02655 101 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ADH1AP07327 375 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 MYL2P10916 166 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 TBCCQ15814 346 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 FAM35AQ86V20 835 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 SERPINB12Q96P63 405 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ADGRE3Q9BY15 652 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 RPTORQ8N122 1335 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CES2O00748 559 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CASQ2O14958 399 aaPredicted RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 TLL1O43897 1013 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 KCNA3P22001 575 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 KDELR1P24390 212 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 ZCWPW2Q504Y3 356 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 C1orf127Q8N9H9 656 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CDC42EP4Q9H3Q1 356 aaKnown RBP14.29□□□□□ -0.12
CTR9-201ENST00000361367 Q9H521 79 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 CD274Q9NZQ7 290 aa14.29□□□□□ -0.12
CTR9-201ENST00000361367 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 OPHN1O60890 802 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 EFCAB14O75071 495 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 PARNO95453 639 aaKnown RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 SLC8A1P32418 973 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 SATB1Q01826 763 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 SP2Q02086 613 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 AARS2Q5JTZ9 985 aaKnown RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 PDZD8Q8NEN9 1154 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 DNPEPQ9ULA0 475 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 DOLKQ9UPQ8 538 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 SHOC2Q9UQ13 582 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 TMEM247A6NEH6 219 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 OR6C75A6NL08 312 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 KRT4P19013 534 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 HDCP19113 662 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 OR1D2P34982 312 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 ACLYP53396 1101 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 NUP93Q8N1F7 819 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 TTPALQ9BTX7 342 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 TRMT13Q9NUP7 481 aaKnown RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 TBC1D13Q9NVG8 400 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 SUPT3HB4E1H0 165 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 OPLAHO14841 1288 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 CCDC22O60826 627 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms