RNA–Protein interactions for RNA: ENST00000361308.8

LMNA-202, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 1,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-202ENST00000361308 TEAD2Q15562 447 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 CC2D1AQ6P1N0 951 aaPredicted RBP17.69■□□□□ 0.42
LMNA-202ENST00000361308 SND1Q7KZF4 910 aaKnown RBP eCLIP17.69■□□□□ 0.421e-8■■□□□ 12.8
LMNA-202ENST00000361308 SLFN11Q7Z7L1 901 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 TAC4Q86UU9 113 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 MIB1Q86YT6 1006 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 PGAP3Q96FM1 320 aaPredicted RBP17.69■□□□□ 0.42
LMNA-202ENST00000361308 SERPINB11Q96P15 392 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 CYP2S1Q96SQ9 504 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 RNF38Q9H0F5 515 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 S1PR5Q9H228 398 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.69■□□□□ 0.42
LMNA-202ENST00000361308 RASAL2Q9UJF2 1139 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 HYOU1Q9Y4L1 999 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 MDM4O15151 490 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 MOSPD3O75425 235 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 ENDOD1O94919 500 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 PFKLP17858 780 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 DDX6P26196 483 aaKnown RBP eCLIP17.69■□□□□ 0.423e-6■□□□□ 9
LMNA-202ENST00000361308 RDXP35241 583 aaKnown RBP17.69■□□□□ 0.42
LMNA-202ENST00000361308 GPR158Q5T848 1215 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 DAB2IPQ5VWQ8 1189 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 SCYL2Q6P3W7 929 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 PEX26Q7Z412 305 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 ARL14EPQ8N8R7 260 aaPredicted RBP17.69■□□□□ 0.42
LMNA-202ENST00000361308 PPM1EQ8WY54 764 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 MSLNLQ96KJ4 702 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 WDR6Q9NNW5 1121 aaKnown RBP17.69■□□□□ 0.42
LMNA-202ENST00000361308 TMEM51Q9NW97 253 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 CALCOCO1Q9P1Z2 691 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 AMFRQ9UKV5 643 aa17.69■□□□□ 0.42
LMNA-202ENST00000361308 TRAV19A0A0A6YYK7 116 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 SOBPA7XYQ1 873 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 ESPNB1AK53 854 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 LRCH4O75427 683 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 IGLV3-25P01717 112 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 FSHRP23945 695 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 PCK1P35558 622 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 HDAC4P56524 1084 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 STXBP5Q5T5C0 1151 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 BNIPLQ7Z465 357 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 ARFGAP1Q8N6T3 406 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 RNF34Q969K3 372 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 RIPOR3Q96MK2 946 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 SLC46A2Q9BY10 475 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 SLITRK6Q9H5Y7 841 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 TASP1Q9H6P5 420 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 WDCPQ9H6R7 721 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 PIGVQ9NUD9 493 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 ZMYM5Q9UJ78 669 aa17.68■□□□□ 0.42
LMNA-202ENST00000361308 CLUHO75153 1309 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 SLC12A8A0AV02 714 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 NRG2O14511 850 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 IRAK2O43187 625 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 MSI1O43347 362 aaKnown RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 FTCDO95954 541 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 MBL2P11226 248 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 MIPP30301 263 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 KPNA1P52294 538 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 ATXN1P54253 815 aaKnown RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 COG7P83436 770 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 HADHQ16836 314 aaKnown RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 RAB6CQ53S08 254 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 OTUD1Q5VV17 481 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 NT5DC3Q86UY8 548 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 SLC35F6Q8N357 371 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 ITFG1Q8TB96 612 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 SLC22A12Q96S37 553 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 RAB6CQ9H0N0 254 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 PCSK1NQ9UHG2 260 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 CDH22Q9UJ99 828 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 USP18Q9UMW8 372 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 TLR6Q9Y2C9 796 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 DOCK6Q96HP0 2047 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 PRPSAP2O60256 369 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 OLFM2O95897 454 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 CKMP06732 381 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 TNNT1P13805 278 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 AVPR1AP37288 418 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 TBX4P57082 545 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 NNTQ13423 1086 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 EIF4EBP2Q13542 120 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 CBX2Q14781 532 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 CLUL1Q15846 466 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 NYAP1Q6ZVC0 841 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 CPNE8Q86YQ8 564 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 UBE2Q2Q8WVN8 375 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 ING5Q8WYH8 240 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 C16orf45Q96MC5 204 aaPredicted RBP17.67■□□□□ 0.42
LMNA-202ENST00000361308 JRKLQ9Y4A0 524 aa17.67■□□□□ 0.42
LMNA-202ENST00000361308 CEBPBP17676 345 aa17.66■□□□□ 0.42
LMNA-202ENST00000361308 CCR1P32246 355 aa17.66■□□□□ 0.42
LMNA-202ENST00000361308 MTHFRP42898 656 aa17.66■□□□□ 0.42
LMNA-202ENST00000361308 CXCR3P49682 368 aa17.66■□□□□ 0.42
LMNA-202ENST00000361308 ETF1P62495 437 aaKnown RBP17.66■□□□□ 0.42
LMNA-202ENST00000361308 TRIP4Q15650 581 aaPredicted RBP17.66■□□□□ 0.42
LMNA-202ENST00000361308 FAM131BQ86XD5 332 aa17.66■□□□□ 0.42
LMNA-202ENST00000361308 RHOT1Q8IXI2 618 aa17.66■□□□□ 0.42
LMNA-202ENST00000361308 CMTM8Q8IZV2 173 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms