RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 CEP57Q86XR8 500 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 INPP5DQ92835 1189 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 ZNF408Q9H9D4 720 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 PRDM16Q9HAZ2 1276 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 PLAC1Q9HBJ0 212 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 NPHS2Q9NP85 383 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 RCOR3Q9P2K3 495 aaPredicted RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 SNRPAP09012 282 aaKnown RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 EZRP15311 586 aaKnown RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 LMO2P25791 158 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 ATXN1P54253 815 aaKnown RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 PARP6Q2NL67 630 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 LGSNQ5TDP6 509 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 ZNF534Q76KX8 674 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 NLRP9Q7RTR0 991 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 CTAGE3PQ8IX95 158 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 PPM1NQ8N819 430 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 SLC2A14Q8TDB8 520 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 C12orf65Q9H3J6 166 aaKnown RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 XAB2Q9HCS7 855 aaKnown RBP27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 USP3Q9Y6I4 520 aa27.31■■□□□ 1.96
CUEDC1-201ENST00000360238 IQCA1LA6NCM1 817 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 DYNC1LI2O43237 492 aaPredicted RBP27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 METTL18O95568 372 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 IL1BP01584 269 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 SNX17Q15036 470 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 KCNT2Q6UVM3 1135 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 CCDC185Q8N715 623 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 TNIP3Q96KP6 325 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 FAM111AQ96PZ2 611 aa27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 GNEQ9Y223 722 aaKnown RBP27.3■■□□□ 1.96
CUEDC1-201ENST00000360238 TRIM49D1C9J1S8 452 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 XPO1O14980 1071 aaKnown RBP27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 SEMA5AQ13591 1074 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 MFSD10Q14728 455 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 NCBP2-AS2Q69YL0 99 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 PSTKQ8IV42 348 aaKnown RBP27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 TSSK1BQ9BXA7 367 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 MKS1Q9NXB0 559 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 TRIP12Q14669 1992 aaPredicted RBP27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 HACD1B0YJ81 288 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 MATKP42679 507 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 ADAM17P78536 824 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 HEATR6Q6AI08 1181 aaKnown RBP27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 UNC5AQ6ZN44 842 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 CCDC91Q7Z6B0 441 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 GSDMBQ8TAX9 411 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 PTPRN2Q92932 1015 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 SIGLEC10Q96LC7 697 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 OLFM3Q96PB7 478 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 TMEM237Q96Q45 408 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 DTLQ9NZJ0 730 aa27.29■■□□□ 1.96
CUEDC1-201ENST00000360238 GLTPD2A6NH11 291 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 COPEO14579 308 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 TGDSO95455 350 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 BZW1Q7L1Q6 419 aaKnown RBP27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 ADGRF2Q8IZF7 708 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 FBXO41Q8TF61 875 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 TMEM40Q8WWA1 233 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 DNAJB3Q8WWF6 145 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 MTBPQ96DY7 904 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 EBNA1BP2Q99848 306 aaKnown RBP27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 TACO1Q9BSH4 297 aaKnown RBP27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 TRIM55Q9BYV6 548 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 IQCGQ9H095 443 aaKnown RBP27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 STK38LQ9Y2H1 464 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 KLF11O14901 512 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 ARL4AP40617 200 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 CCNFP41002 786 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 UBXN11Q5T124 520 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 FAM182AQ5T1J6 154 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 RNF19AQ9NV58 838 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 KLK14Q9P0G3 267 aa27.28■■□□□ 1.96
CUEDC1-201ENST00000360238 CXorf49A8MYA2 514 aaPredicted RBP27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 HUS1O60921 280 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 DAB1O75553 588 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 WARSP23381 471 aaKnown RBP27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 TARSP26639 723 aaKnown RBP27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 RASSF2P50749 326 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 PRKD1Q15139 912 aaPredicted RBP27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 SLC25A52Q3SY17 297 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 ZNF618Q5T7W0 954 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 TOP6BLQ8N6T0 577 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 LRRN4Q8WUT4 740 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 SRPK1Q96SB4 655 aaKnown RBP27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 ZFP69BQ9UJL9 534 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 FZD10Q9ULW2 581 aa27.27■■□□□ 1.96
CUEDC1-201ENST00000360238 FAM159BA6NKW6 160 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 DGKIO75912 1065 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 PLEKHG4Q58EX7 1191 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 HACE1Q8IYU2 909 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 B3GALNT2Q8NCR0 500 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 TFB1MQ8WVM0 346 aaKnown RBP27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 SYT17Q9BSW7 474 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 SAR1AQ9NR31 198 aa27.26■■□□□ 1.96
CUEDC1-201ENST00000360238 HNRNPCL1O60812 293 aaKnown RBP27.26■■□□□ 1.95
CUEDC1-201ENST00000360238 KRT38O76015 456 aa27.26■■□□□ 1.95
CUEDC1-201ENST00000360238 WFS1O76024 890 aa27.26■■□□□ 1.95
CUEDC1-201ENST00000360238 TKTP29401 623 aaKnown RBP27.26■■□□□ 1.95
CUEDC1-201ENST00000360238 SERPINB4P48594 390 aa27.26■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms